RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GRAP2O75791 330 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 APOA1P02647 267 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 CPA2P48052 419 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
LCA5-202ENST00000392959 NEK2P51955 445 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 FRMD8Q9BZ67 464 aaPredicted RBP13.74□□□□□ -0.21
LCA5-202ENST00000392959 CDY2AQ9Y6F7 541 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 CDY1Q9Y6F8 540 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 ENTPD3O75355 529 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 MAP4P27816 1152 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 RXRBP28702 533 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 GRB10Q13322 594 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 EMC2Q15006 297 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 TTC23LQ6PF05 361 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 APOBEC3FQ8IUX4 373 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 MMP19Q99542 508 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 MXRA8Q9BRK3 442 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 PI4K2AQ9BTU6 479 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 MMTAG2Q9BU76 263 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 VCPKMTQ9H867 229 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 FOXN3O00409 490 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 ZNF197O14709 1029 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 PSMD3O43242 534 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 CAMTA2O94983 1202 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 MYL2P10916 166 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 RARGP13631 454 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 PDIA6Q15084 440 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 ZNF772Q68DY9 489 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 CDC42EP5Q6NZY7 148 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 TSPAN17Q96FV3 270 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 MED15Q96RN5 788 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 NIF3L1Q9GZT8 377 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 POLIQ9UNA4 740 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 TRIM49D1C9J1S8 452 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 POLBP06746 335 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 PON1P27169 355 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 VHLP40337 213 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 NPEPPSP55786 919 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 RBBP7Q16576 425 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 TTC39BQ5VTQ0 682 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 SETD3Q86TU7 594 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 DTNBP1Q96EV8 351 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 CRAMP1Q96RY5 1269 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 C20orf96Q9NUD7 363 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 IGSF9BQ9UPX0 1349 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 UNC13BO14795 1591 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 ASB14A6NK59 587 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 C16orf96A6NNT2 1141 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 GTF2H1P32780 548 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 SERPINB10P48595 397 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 ZC3H12BQ5HYM0 836 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 NUP93Q8N1F7 819 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
LCA5-202ENST00000392959 AFF4Q9UHB7 1163 aaKnown RBP13.73□□□□□ -0.21
LCA5-202ENST00000392959 H3BQF6 201 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 SYF2O95926 243 aaKnown RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 HMOX2P30519 316 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 MTMR2Q13614 643 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 CHI3L2Q15782 390 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 LRRC6Q86X45 466 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 LZICQ8WZA0 190 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 TMBIM4Q9HC24 238 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 ZCCHC11Q5TAX3 1644 aaKnown RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 SLC37A4O43826 429 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 PRKCEQ02156 737 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 MROH9Q5TGP6 573 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 TLR2O60603 784 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 MAP3K10Q02779 954 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 PDK1Q15118 436 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 FAM71DQ8N9W8 422 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 ZNF229Q9UJW7 825 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 HERVK_113P62684 666 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 RAD51Q06609 339 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 SPHKAPQ2M3C7 1700 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms