RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 TERF2Q15554 542 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SLC10A6Q3KNW5 377 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 TLK2Q86UE8 772 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 PASD1Q8IV76 773 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 CXorf38Q8TB03 319 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 GDAP1L1Q96MZ0 367 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SETD4Q9NVD3 440 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 Q9Y3F1 56 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SMIM35A0A1B0GVV1 85 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 PROSCO94903 275 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 CALB1P05937 261 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SMIM10L2AP0DMW4 78 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SMIM10L2BP0DMW5 78 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SP3Q02447 781 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 MAMLD1Q13495 774 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 ALS2CLQ60I27 953 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 TMEM35BQ8NCS4 154 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 SOCS4Q8WXH5 440 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 PARVAQ9NVD7 372 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 FLRT1Q9NZU1 646 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 CITO14578 2027 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 FAM187AA6NFU0 413 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 POLR3GO15318 223 aaPredicted RBP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 PHF2O75151 1096 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 KRT19P08727 400 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 PAEPP09466 180 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 WEE2P0C1S8 567 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 PYGMP11217 842 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 EIF4BP23588 611 aaKnown RBP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 CHRNA3P32297 505 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 RGS2P41220 211 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 GRM5P41594 1212 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 LACTBP83111 547 aaPredicted RBP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 TMEM132DQ14C87 1099 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 MMS22LQ6ZRQ5 1243 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 KAT2BQ92831 832 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 RUNDC3BQ96NL0 473 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 ACAP3Q96P50 834 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 GCOM2Q9BZD3 368 aaPredicted RBP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 RAB17Q9H0T7 212 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 CYP3A43Q9HB55 503 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 ITGA11Q9UKX5 1188 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 UTP11Q9Y3A2 253 aaKnown RBP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTPN11-202ENST00000392597 NR2E1Q9Y466 385 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 CEP83Q9Y592 693 aa21.34■■□□□ 1.01
PTPN11-202ENST00000392597 GOLGA6BA6NDN3 693 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 STAU1O95793 577 aaKnown RBP21.33■■□□□ 1.01
PTPN11-202ENST00000392597 P4HA1P13674 534 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 BRD2P25440 801 aaKnown RBP21.33■■□□□ 1.01
PTPN11-202ENST00000392597 MAN1A1P33908 653 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 CPT1AP50416 773 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 PRAMEF19Q5SWL8 479 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 SCARA5Q6ZMJ2 495 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 SLC13A5Q86YT5 568 aaPredicted RBP21.33■■□□□ 1.01
PTPN11-202ENST00000392597 FAM114A2Q9NRY5 505 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 MTUS1Q9ULD2 1270 aa21.33■■□□□ 1.01
PTPN11-202ENST00000392597 MED7O43513 233 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 GPR32O75388 356 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 IGHA2P01877 340 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 ITGB3P05106 788 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 CYP1B1Q16678 543 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 WDR72Q3MJ13 1102 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 CPNE8Q86YQ8 564 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.32■■□□□ 1
PTPN11-202ENST00000392597 APBA2Q99767 749 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 TRIM7Q9C029 511 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 PLEKHA5Q9HAU0 1116 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 NXF1Q9UBU9 619 aaKnown RBP21.32■■□□□ 1
PTPN11-202ENST00000392597 RALGAPA2Q2PPJ7 1873 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 HAS3O00219 553 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 TTI1O43156 1089 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 DR1Q01658 176 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 MFSD10Q14728 455 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 KIZQ2M2Z5 673 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 PRELID2Q8N945 189 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 LHX5Q9H2C1 402 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 PLEKHA4Q9H4M7 779 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 ERVK-5Q9HDB9 667 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 PCYOX1Q9UHG3 505 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 POLIQ9UNA4 740 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 DERAQ9Y315 318 aa21.32■■□□□ 1
PTPN11-202ENST00000392597 PSTPIP1O43586 416 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 ECHS1P30084 290 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 ADAM17P78536 824 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 TAP1Q03518 808 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 AADACL2Q6P093 401 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 TTC39CQ8N584 583 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 FEZF2Q8TBJ5 459 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 GJD2Q9UKL4 321 aa21.31■■□□□ 1
PTPN11-202ENST00000392597 TNPO2O14787 897 aaKnown RBP21.3■■□□□ 1
PTPN11-202ENST00000392597 SYF2O95926 243 aaKnown RBP21.3■■□□□ 1
PTPN11-202ENST00000392597 FAM153BP0C7A2 387 aa21.3■■□□□ 1
PTPN11-202ENST00000392597 HOXA11P31270 313 aaPredicted RBP21.3■■□□□ 1
PTPN11-202ENST00000392597 CYP2C19P33261 490 aa21.3■■□□□ 1
PTPN11-202ENST00000392597 FCGRTP55899 365 aa21.3■■□□□ 1
PTPN11-202ENST00000392597 HLTFQ14527 1009 aaKnown RBP eCLIP21.3■■□□□ 1
PTPN11-202ENST00000392597 FAM153CQ494X1 144 aa21.3■■□□□ 1
PTPN11-202ENST00000392597 ZNF394Q53GI3 561 aa21.3■■□□□ 1
PTPN11-202ENST00000392597 C2CD6Q53TS8 623 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms