RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RIN2Q8WYP3 895 aaPredicted RBP7.28□□□□□ -1.24
UBBP1-201ENST00000392399 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 PABPC5Q96DU9 382 aaKnown RBP7.28□□□□□ -1.24
UBBP1-201ENST00000392399 HPDLQ96IR7 371 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 SENP8Q96LD8 212 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 KLHL5Q96PQ7 755 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 HS3ST6Q96QI5 342 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 NAT10Q9H0A0 1025 aaKnown RBP7.28□□□□□ -1.24
UBBP1-201ENST00000392399 THAP9Q9H5L6 903 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 TMEM8AQ9HCN3 771 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 CACNG4Q9UBN1 327 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 SIX4Q9UIU6 781 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 MAFFQ9ULX9 164 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 COG5Q9UP83 839 aa7.28□□□□□ -1.24
UBBP1-201ENST00000392399 PTPRJQ12913 1337 aa7.27□□□□□ -1.24
UBBP1-201ENST00000392399 KIAA1671Q9BY89 1806 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 EYSQ5T1H1 3165 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 OR6C75A6NL08 312 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 C2CD2LO14523 706 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CYB561D2O14569 222 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 PPEF2O14830 753 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 SPTLC1O15269 473 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 P4HA2O15460 535 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TEX28O15482 410 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TBC1D4O60343 1298 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 HUS1O60921 280 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CAVIN2O95810 425 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CNPP09543 421 aaKnown RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 P4HA1P13674 534 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 HOXB8P17481 243 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 IGFBP6P24592 240 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 KLRC2P26717 231 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TKTP29401 623 aaKnown RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CA8P35219 290 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 NRIP1P48552 1158 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 LHX1P48742 406 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 DLG4P78352 724 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 YWHAHQ04917 246 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 HYAL1Q12794 435 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 SMARCB1Q12824 385 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 BIRC3Q13489 604 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 NCOA4Q13772 614 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 RAB33AQ14088 237 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 PSMD5Q16401 504 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CTC1Q2NKJ3 1217 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CCDC40Q4G0X9 1142 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 RTP2Q5QGT7 225 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 VARS2Q5ST30 1063 aaKnown RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 C1orf220Q5T0J3 134 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TCERG1LQ5VWI1 586 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TDRD10Q5VZ19 366 aaKnown RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 LMBRD2Q68DH5 695 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 SLC8B1Q6J4K2 584 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF280DQ6N043 979 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TRIM59Q8IWR1 403 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 THEM5Q8N1Q8 247 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 MICALL1Q8N3F8 863 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 TOP6BLQ8N6T0 577 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CCDC150Q8NCX0 1101 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 CASP10Q92851 521 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 EEF2KMTQ96G04 330 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 IMPG2Q9BZV3 1241 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 PLEKHA4Q9H4M7 779 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 FAM124BQ9H5Z6 455 aaPredicted RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 MTRRQ9UBK8 725 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 COQ4Q9Y3A0 265 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 PDCD11Q14690 1871 aaKnown RBP7.27□□□□□ -1.25
UBBP1-201ENST00000392399 REV3LO60673 3130 aa7.27□□□□□ -1.25
UBBP1-201ENST00000392399 XIRP2A4UGR9 3374 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 PLXNA4Q9HCM2 1894 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 I3L4J1 428 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 PER2O15055 1255 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 N4BP1O75113 896 aaKnown RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CLASP2O75122 1294 aaKnown RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 TACC1O75410 805 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 GLUD1P00367 558 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 ASS1P00966 412 aaKnown RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 GCLMP48507 274 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 MXI1P50539 228 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CLCN4P51793 760 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 TNNC1P63316 161 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 MYL7Q01449 175 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 TYRO3Q06418 890 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 PPP3CAQ08209 521 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 KCNC3Q14003 757 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SKIV2LQ15477 1246 aaKnown RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CCDC85BQ15834 202 aaPredicted RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 WDR72Q3MJ13 1102 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CTXN3Q4LDR2 81 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 DCAF17Q5H9S7 520 aaPredicted RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 TPGS2Q68CL5 300 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SMYD5Q6GMV2 418 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 OVOS1Q6IE37 1185 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 LILRA6Q6PI73 481 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CYP26C1Q6V0L0 522 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms