RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PTGESO14684 152 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 GZMAP12544 262 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 ITGA4P13612 1032 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 KCNE1P15382 129 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 MLH1P40692 756 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 CBX1P83916 185 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 AMPD2Q01433 879 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 CLEC16AQ2KHT3 1053 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 GAD1Q99259 594 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 PSMB7Q99436 277 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 ADAM2Q99965 735 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 UNGP13051 313 aaPredicted RBP13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 DNA2P51530 1060 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 TNNC1P63316 161 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 TPCN2Q8NHX9 752 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 WHAMMQ8TF30 809 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 MIOSQ9NXC5 875 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 NCANO14594 1321 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 CDK7P50613 346 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 MYO1EQ12965 1108 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 DSC3Q14574 896 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ACAD10Q6JQN1 1059 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 LLGL2Q6P1M3 1020 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 AGMOQ6ZNB7 445 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF677Q86XU0 584 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 RFFLQ8WZ73 363 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ATP8B3O60423 1300 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ANO9A1A5B4 782 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF185O15231 689 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 SPTLC1O15269 473 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 CD19P15391 556 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 CXCR5P32302 372 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 RAD23BP54727 409 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 PAPD7Q5XG87 772 aaKnown RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 RABGGTAQ92696 567 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
SPTBN1-203ENST00000389980 TLR10Q9BXR5 811 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 CTTNBP2NLQ9P2B4 639 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 CDC23Q9UJX2 597 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 OGDHLQ9ULD0 1010 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 HYOU1Q9Y4L1 999 aa13□□□□□ -0.33
SPTBN1-203ENST00000389980 A0A0A6YYK5 440 aaPredicted RBP12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 PIRO00625 290 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 CILPO75339 1184 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 P4HA1P13674 534 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 NDST1P52848 882 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 YWHAEP62258 255 aaKnown RBP12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 NOMO3P69849 1222 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 GPC5P78333 572 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 LRRC57Q8N9N7 239 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 SLC4A11Q8NBS3 891 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 CAPZA3Q96KX2 299 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
SPTBN1-203ENST00000389980 HCRTO43612 131 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 BUB1BO60566 1050 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 STAU1O95793 577 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 CD4P01730 458 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 SCNN1GP51170 649 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 DPH6Q7L8W6 267 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 DAAM2Q86T65 1068 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 RTN4RL1Q86UN2 441 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 CYP3A43Q9HB55 503 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 NME7Q9Y5B8 376 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 TDRD15B5MCY1 1934 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 A0A0U1RQF3 1178 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 CAND2O75155 1236 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 CENPCQ03188 943 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms