RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 SESN3P58005 492 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 CDR2Q01850 454 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SLC18A3Q16572 532 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TBC1D1Q86TI0 1168 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SPATA17Q96L03 361 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TMEM117Q9H0C3 514 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 CFLARO15519 480 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 CTDNEP1O95476 244 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SYF2O95926 243 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 INSRRP14616 1297 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 NPTX2P47972 431 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ZNF177Q13360 481 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 MRPL46Q9H2W6 279 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PMS2P54278 862 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 CUL2Q13617 745 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PTGISQ16647 500 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ADGRF2Q8IZF7 708 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SERPINI1Q99574 410 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 DDX47Q9H0S4 455 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 FAM96AQ9H5X1 160 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 CAPN7Q9Y6W3 813 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 DDX5P17844 614 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PTPRAP18433 802 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 GALCP54803 685 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SESN2P58004 480 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 GRB10Q13322 594 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PDK1Q15118 436 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 IQSEC1Q6DN90 963 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 IPPQ9Y573 584 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PFDN1O60925 122 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 PSEN2P49810 448 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SMAD1Q15797 465 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TAF2Q6P1X5 1199 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ATL2Q8NHH9 583 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 KRT35Q92764 455 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ABTB1Q969K4 478 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
LAMA4-205ENST00000389463 TRPM5Q9NZQ8 1165 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
LAMA4-205ENST00000389463 MSCO60682 206 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 SLC9A1P19634 815 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 LAMTOR4Q0VGL1 99 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 DHX34Q14147 1143 aaKnown RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 AP1ARQ63HQ0 302 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 MFN1Q8IWA4 741 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 CLCA2Q9UQC9 943 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 MGEA5O60502 916 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 CKMP06732 381 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 GARTP22102 1010 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 LHX1P48742 406 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 PHEXP78562 749 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 BTG3Q14201 252 aaPredicted RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FASTKD1Q53R41 847 aaKnown RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 TRIM15Q9C019 465 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 MTMR12Q9C0I1 747 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FZD1Q9UP38 647 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 ADCY3O60266 1144 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FKTNO75072 461 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 NR1D1P20393 614 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 TYK2P29597 1187 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 SP3Q02447 781 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FMR1Q06787 632 aaKnown RBP eCLIP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 NOGQ13253 232 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 TBCCQ15814 346 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 ZSCAN26Q16670 478 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 EPM2AIP1Q7L775 607 aaPredicted RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 AIPL1Q9NZN9 384 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 NDUFS3O75489 264 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 PCSK7Q16549 785 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 NCLNQ969V3 563 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
LAMA4-205ENST00000389463 KIAA1257Q9ULG3 409 aa11.54□□□□□ -0.56
LAMA4-205ENST00000389463 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
LAMA4-205ENST00000389463 TCRBV5S4A2TA0A5A2 114 aa11.53□□□□□ -0.56
LAMA4-205ENST00000389463 F5H5T6 163 aa11.53□□□□□ -0.56
LAMA4-205ENST00000389463 ACO1P21399 889 aaKnown RBP11.53□□□□□ -0.56
LAMA4-205ENST00000389463 DNAJB2P25686 324 aa11.53□□□□□ -0.56
LAMA4-205ENST00000389463 ETFBP38117 255 aa11.53□□□□□ -0.56
LAMA4-205ENST00000389463 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms