RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 MAGEB18Q96M61 343 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SMAPO00193 183 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SPAG6O75602 509 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 RARAP10276 462 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 GYS1P13807 737 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 RFC1P35251 1148 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ALDH18A1P54886 795 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 STX3Q13277 289 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 HIC1Q14526 733 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 PPIL6Q8IXY8 311 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-204ENST00000380756 B2RBV5 119 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PIK3R2O00459 728 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CREB3O43889 395 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PROSCO94903 275 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 ACTR2P61160 394 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CBWD6Q4V339 395 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CBWD3Q5JTY5 395 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CBWD5Q5RIA9 395 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 OTOP1Q7RTM1 612 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 ICAM1P05362 532 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 SNRPAP09012 282 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PDE1CQ14123 709 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CCNG2Q16589 344 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 CCNYL1Q8N7R7 359 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 RDM1Q8NG50 284 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 KRT35Q92764 455 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 TRIM33Q9UPN9 1127 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 RHBDL3P58872 404 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 OCRLQ01968 901 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 OVGP1Q12889 678 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 MTBPQ96DY7 904 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 HAO1Q9UJM8 370 aa13.36□□□□□ -0.27
DNMT3A-204ENST00000380756 PFDN6O15212 129 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 CTCFP49711 727 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 ANO5Q75V66 913 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 FUKQ8N0W3 1084 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 NAALADL1Q9UQQ1 740 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 ZBTB39O15060 712 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 RARRES1P49788 294 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 AP1B1Q10567 949 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 DNAL1Q4LDG9 190 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 FAM71DQ8N9W8 422 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 THTPAQ9BU02 230 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 PAK5Q9P286 719 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 A8MXQ7 604 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 RGS7P49802 495 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 LRRC23Q53EV4 343 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 ARHGEF19Q8IW93 802 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 MTFR1LQ9H019 292 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 HUS1O60921 280 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 GARTP22102 1010 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 MXD4Q14582 209 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 CYP4A22Q5TCH4 519 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 KLC3Q6P597 504 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 EXD1Q8NHP7 514 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 STAMBPL1Q96FJ0 436 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 NSL1Q96IY1 281 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 SPATA33Q96N06 139 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 PCMTD2Q9NV79 361 aa13.35□□□□□ -0.27
DNMT3A-204ENST00000380756 FRMPD4Q14CM0 1322 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms