RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 VCPP55072 806 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 DLG1Q12959 904 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PHKG1Q16816 387 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 COBLL1Q53SF7 1204 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 HSP90AA5PQ58FG0 334 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 DCAF6Q58WW2 860 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SPDYAQ5MJ70 313 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 TTC38Q5R3I4 469 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 KAZNQ674X7 775 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SIGIRRQ6IA17 410 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 DHRS4L2Q6PKH6 230 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RFPL4BQ6ZWI9 263 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 UBE2Q1Q7Z7E8 422 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CROCCP2Q86T23 111 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 EEF2KMTQ96G04 330 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GRIP2Q9C0E4 1043 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 KCNK9Q9NPC2 374 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CEP72Q9P209 647 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 STARD13Q9Y3M8 1113 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC22O60826 627 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 MSL3P1P0C860 447 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 UQCRBP14927 111 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ACADSBP45954 432 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GSSP48637 474 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RPS3AP61247 264 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 TUBA4AP68366 448 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PLCB3Q01970 1234 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PRKG1Q13976 671 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PDK3Q15120 406 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RPS6KA1Q15418 735 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SFT2D3Q587I9 215 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 TMTC4Q5T4D3 741 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 MOXD1Q6UVY6 613 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 MAMSTRQ6ZN01 415 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RFX8Q6ZV50 586 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GABPB2Q8TAK5 448 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ACTRT2Q8TDY3 377 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GIMAP1Q8WWP7 306 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ERLEC1Q96DZ1 483 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ERGIC2Q96RQ1 377 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 KLHL4Q9C0H6 718 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 B3GNT4Q9C0J1 378 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 EHD1Q9H4M9 534 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RIOX1Q9H6W3 641 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SIAEQ9HAT2 523 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SLC38A7Q9NVC3 462 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 USP40Q9NVE5 1235 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 NDE1Q9NXR1 346 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 C15orf38-AP3S2A0A0A6YYH1 394 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 LRRC53A6NM62 1247 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 K7EPI3 171 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 STAM2O75886 525 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 HAUS5O94927 633 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GAS8O95995 478 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CDH3P22223 829 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PRKACBP22694 351 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SERPINB6P35237 376 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CDK8P49336 464 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 POLR2FP61218 127 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 NOP14P78316 857 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CACNB1Q02641 598 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ASPHQ12797 758 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 EIF2B5Q13144 721 aaKnown RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ACAP1Q15027 740 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SF3B4Q15427 424 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 NDUFA5Q16718 116 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 MIIPQ5JXC2 388 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 FYB2Q5VWT5 728 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PDXDC1Q6P996 788 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ARPINQ7Z6K5 226 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RASSF3Q86WH2 238 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RTKN2Q8IZC4 609 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SH3RF3Q8TEJ3 882 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 C10orf82Q8WW14 230 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 RAB34Q9BZG1 259 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 SNX25Q9H3E2 840 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 GOLPH3Q9H4A6 298 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ZFP69BQ9UJL9 534 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 PITPNM2Q9BZ72 1349 aa7.88□□□□□ -1.15
CDKL5-201ENST00000379989 ARHGAP10A1A4S6 786 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 A8MXQ7 604 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 RBAK-RBAKDNI3L0D1 243 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 HNRNPCL1O60812 293 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 VCLP18206 1134 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 FGFR4P22455 802 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 IL4RP24394 825 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PHKA2P46019 1235 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ERFP50548 548 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 NONOQ15233 471 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 KCNJ8Q15842 424 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 DUPD1Q68J44 220 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PPP1R2P3Q6NXS1 205 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 FBXL19Q6PCT2 694 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ZDHHC24Q6UX98 284 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms