RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DSTYKQ6XUX3 929 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
CCDC107-204ENST00000378409 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 SENP8Q96LD8 212 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 CYP3A43Q9HB55 503 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 CISHQ9NSE2 258 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
CCDC107-204ENST00000378409 CYB561D2O14569 222 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 NRP1O14786 923 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 HUS1O60921 280 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 ALDH2P05091 517 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 ITGB1P05556 798 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 FERP16591 822 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 ATP2A2P16615 1042 aaKnown RBP16.88■□□□□ 0.29
CCDC107-204ENST00000378409 ACO1P21399 889 aaKnown RBP16.88■□□□□ 0.29
CCDC107-204ENST00000378409 SLC11A1P49279 550 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 TMEM270Q6UE05 265 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 HERC6Q8IVU3 1022 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 UBR7Q8N806 425 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 APPL2Q8NEU8 664 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 SYN2Q92777 582 aaPredicted RBP16.88■□□□□ 0.29
CCDC107-204ENST00000378409 COLEC11Q9BWP8 271 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 CWH43Q9H720 699 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 AIPL1Q9NZN9 384 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 FAN1Q9Y2M0 1017 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 MYH10P35580 1976 aa16.88■□□□□ 0.29
CCDC107-204ENST00000378409 TMEM189-UBE2V1I3L0A0 370 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 I3L4J1 428 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 CYP26A1O43174 497 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 GALTP07902 379 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 SKILP12757 684 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 PAX3P23760 479 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 PBX3P40426 434 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 BRCC3P46736 316 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 BCAR1P56945 870 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 TIGD5Q53EQ6 642 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 CD300LGQ6UXG3 332 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 FAM71AQ8IYT1 594 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 TOP6BLQ8N6T0 577 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 RBBP8NLQ8NC74 664 aaPredicted RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 PHOSPHO2Q8TCD6 241 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 BAG1Q99933 345 aaPredicted RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 L1RE1Q9UN81 338 aa16.87■□□□□ 0.29
CCDC107-204ENST00000378409 MRPL42Q9Y6G3 142 aaKnown RBP16.87■□□□□ 0.29
CCDC107-204ENST00000378409 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 TADA2AO75478 443 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 SERPING1P05155 500 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 CCDC172P0C7W6 258 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 ODC1P11926 461 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
CCDC107-204ENST00000378409 MEA1Q16626 185 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
CCDC107-204ENST00000378409 IRF2BP2Q7Z5L9 587 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 ADGRF2Q8IZF7 708 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
CCDC107-204ENST00000378409 MRPL45Q9BRJ2 306 aaKnown RBP16.86■□□□□ 0.29
CCDC107-204ENST00000378409 SNX25Q9H3E2 840 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 FAM124BQ9H5Z6 455 aaPredicted RBP16.86■□□□□ 0.29
CCDC107-204ENST00000378409 MARCH5Q9NX47 278 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
CCDC107-204ENST00000378409 TRAPPC3O43617 180 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 NRDCO43847 1150 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 TLL1O43897 1013 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 TACC1O75410 805 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 CLCN1P35523 988 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 NDST1P52848 882 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 INCA1Q0VD86 236 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 SHHQ15465 462 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 WSCD1Q658N2 575 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 CYP26C1Q6V0L0 522 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 DPH6Q7L8W6 267 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 PDCL2Q8N4E4 241 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 FIBCD1Q8N539 461 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 OR6B3Q8NGW1 331 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
CCDC107-204ENST00000378409 SUSD3Q96L08 255 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 RAD9AQ99638 391 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 CHP1Q99653 195 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
CCDC107-204ENST00000378409 KCNF1Q9H3M0 494 aa16.85■□□□□ 0.29
CCDC107-204ENST00000378409 HMGXB4Q9UGU5 601 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms