RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 ARL8AQ96BM9 186 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 TRIM39Q9HCM9 518 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 C6orf203Q9P0P8 240 aaPredicted RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 CDH2P19022 906 aaPredicted RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 KDSRQ06136 332 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 SPATA2LQ8IUW3 424 aaPredicted RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 FAM81AQ8TBF8 368 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 ARHGEF1Q92888 912 aaKnown RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 OTUD5Q96G74 571 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 PLEKHA5Q9HAU0 1116 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 ZC3H4Q9UPT8 1303 aaKnown RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 SRGNP10124 158 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 PDAP1Q13442 181 aaKnown RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 XKR3Q5GH77 459 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 CROCCP3Q8IVE0 287 aa15.61■□□□□ 0.09
EXT1-201ENST00000378204 FAM84BQ96KN1 310 aaPredicted RBP15.61■□□□□ 0.09
EXT1-201ENST00000378204 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.091e-8■□□□□ 10.8
EXT1-201ENST00000378204 PRKCBP05771 671 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 PYGMP11217 842 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 VHLP40337 213 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 MDH1P40925 334 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 TRIM28Q13263 835 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 CCDC149Q6ZUS6 474 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 XPO7Q9UIA9 1087 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 PITPNM2Q9BZ72 1349 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 NMT1P30419 496 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 TJAP1Q5JTD0 557 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 RFX8Q6ZV50 586 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 TRAPPC11Q7Z392 1133 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 AGAP3Q96P47 875 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 SERPINB9P50453 376 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ALDH18A1P54886 795 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 ARPC4P59998 168 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 FOXO4P98177 505 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 MTF1Q14872 753 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 TMEM132DQ14C87 1099 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 DNAL1Q4LDG9 190 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 NLRP9Q7RTR0 991 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 PCYOX1LQ8NBM8 494 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ZNF555Q8NEP9 628 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ASZ1Q8WWH4 475 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 PDLIM2Q96JY6 352 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ZC3H7BQ9UGR2 993 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 FAM32AQ9Y421 112 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 P4HA2O15460 535 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 S100A1P23297 94 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 SGSM1Q2NKQ1 1148 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 EMC3Q9P0I2 261 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 CCDC78A2IDD5 438 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ASNA1O43681 348 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 ENO1P06733 434 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 APPL2Q8NEU8 664 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 KRT35Q92764 455 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 SLC40A1Q9NP59 571 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 NPHS2Q9NP85 383 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 UCHL3P15374 230 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 DMC1Q14565 340 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 DEPDC1Q5TB30 811 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 TBC1D19Q8N5T2 526 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 CCT7Q99832 543 aa15.6■□□□□ 0.09
EXT1-201ENST00000378204 PSMC3IPQ9P2W1 217 aaPredicted RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 PIN4Q9Y237 131 aaKnown RBP15.6■□□□□ 0.09
EXT1-201ENST00000378204 KPNA4O00629 521 aaPredicted RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 NUP107P57740 925 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 ZNF200P98182 395 aaPredicted RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 COG2Q14746 738 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 ANKS3Q6ZW76 656 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 NFIBO00712 420 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 HNRNPRO43390 633 aaKnown RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 FAM47DPA6NHR8 397 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 TAF4O00268 1085 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 ZNF185O15231 689 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 PJA2O43164 708 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 CYBBP04839 570 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 AKR1B1P15121 316 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 GALCP54803 685 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 VSNL1P62760 191 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 EXOSC10Q01780 885 aaKnown RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 TMEM245Q9H330 911 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 FANCEQ9HB96 536 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 NEU2Q9Y3R4 380 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 NDUFS3O75489 264 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 SULT1E1P49888 294 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 SNRNP35Q16560 246 aaKnown RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 COBLL1Q53SF7 1204 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 PTPRN2Q92932 1015 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 OTULINQ96BN8 352 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 MTMR4Q9NYA4 1195 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 USP15Q9Y4E8 981 aaPredicted RBP15.59■□□□□ 0.09
EXT1-201ENST00000378204 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 TUBA4AP68366 448 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 RUNX1T1Q06455 604 aa15.59■□□□□ 0.09
EXT1-201ENST00000378204 SMAD1Q15797 465 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms