RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 METTL5Q9NRN9 209 aaKnown RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 BTBD7Q9P203 1132 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 SNCAIPQ9Y6H5 919 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 MOCS2O96007 188 aaPredicted RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 TFRCP02786 760 aaKnown RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 MCF2P10911 925 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 TERF2Q15554 542 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 ABHD15Q6UXT9 468 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 SLC13A5Q86YT5 568 aaPredicted RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 MBOAT7Q96N66 472 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 RALAP11233 206 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 RAP1GAPP47736 663 aa15.3■□□□□ 0.04
TCOF1-202ENST00000377797 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 DMGDHQ9UI17 866 aaKnown RBP15.3■□□□□ 0.04
TCOF1-202ENST00000377797 ITGB4P16144 1822 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 CAPSQ13938 189 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 MEI1Q5TIA1 1274 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 ZNF606Q8WXB4 792 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 GANQ9H2C0 597 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 TMEM134Q9H6X4 195 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
TCOF1-202ENST00000377797 GIPC1O14908 333 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 MAFO75444 373 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-202ENST00000377797 PCSK1P29120 753 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-202ENST00000377797 PRAMEF19Q5SWL8 479 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 BTBD8Q5XKL5 378 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 PHLDB3Q6NSJ2 640 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 LENG9Q96B70 501 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 MED15Q96RN5 788 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 B3GAT3O94766 335 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
TCOF1-202ENST00000377797 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 ZBED2Q9BTP6 218 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 TLR10Q9BXR5 811 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
TCOF1-202ENST00000377797 H3BRJ5 948 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 CST8O60676 142 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 FARP2O94887 1054 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 VDRP11473 427 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 KCNA2P16389 499 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PRKCIP41743 596 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 F5H423 210 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 TADA2AO75478 443 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 CRCPO75575 148 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PTPN11Q06124 597 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 CCDC62Q6P9F0 684 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 GPR142Q7Z601 462 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 ZBED8Q8IZ13 594 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 ACSF2Q96CM8 615 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 ACP6Q9NPH0 428 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 APOL1O14791 398 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 AKR1A1P14550 325 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PSMC4P43686 418 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 CLEC16AQ2KHT3 1053 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 LRRN4CLQ8ND94 238 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 RIN2Q8WYP3 895 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 SCYL1Q96KG9 808 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 ASB7Q9H672 318 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 KCND1Q9NSA2 647 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 CNTNAP1P78357 1384 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 GPD1P21695 349 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 BYSLQ13895 437 aaKnown RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 NOP9Q86U38 636 aaKnown RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 SRRM1Q8IYB3 904 aaKnown RBP15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PPP1R13LQ8WUF5 828 aa15.28■□□□□ 0.04
TCOF1-202ENST00000377797 PJA2O43164 708 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 SULT1E1P49888 294 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 MFSD10Q14728 455 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 LRRC31Q6UY01 552 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 TTC25Q96NG3 672 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 RASSF4Q9H2L5 321 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 DONSONQ9NYP3 566 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 RASA4BC9J798 803 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 RASA4O43374 803 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-202ENST00000377797 GRIK1P39086 918 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 RTP1P59025 263 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 BEX3Q00994 111 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 AP1B1Q10567 949 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 PLPPR4Q7Z2D5 763 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 CDKL3Q8IVW4 592 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-202ENST00000377797 PPP4R1Q8TF05 950 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 SOCS4Q8WXH5 440 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 CCDC68Q9H2F9 335 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 GPR182O15218 404 aa15.27■□□□□ 0.04
TCOF1-202ENST00000377797 FKBP1BP68106 108 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms