RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZFYVE27Q5T4F4 411 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 PPP1R2P3Q6NXS1 205 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 SCYL3Q8IZE3 742 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 WRNIP1Q96S55 665 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 TARS2Q9BW92 718 aaKnown RBP26.79■■□□□ 1.88
C9orf40-201ENST00000376854 PPP1R1BQ9UD71 204 aaPredicted RBP26.79■■□□□ 1.88
C9orf40-201ENST00000376854 ACTL7BQ9Y614 415 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 LIASO43766 372 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 PIGRP01833 764 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 KRT10P13645 584 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 PTPRAP18433 802 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 GLRA2P23416 452 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 MKRN3Q13064 507 aaKnown RBP26.79■■□□□ 1.88
C9orf40-201ENST00000376854 GALNTL6Q49A17 601 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 CEP128Q6ZU80 1094 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 ZNF280CQ8ND82 737 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 MAGEB18Q96M61 343 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 FOXP3Q9BZS1 431 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 PORCNQ9H237 461 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 WDR81Q562E7 1941 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 DOCK5Q9H7D0 1870 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 SPATA31C2B4DYI2 1134 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 LDHAP00338 332 aaKnown RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 SLC8A1P32418 973 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 NAMPTP43490 491 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 RPL7AP62424 266 aaKnown RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 GNPTABQ3T906 1256 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 RCOR2Q8IZ40 523 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 GBP7Q8N8V2 638 aaPredicted RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 OR5B17Q8NGF7 314 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 NOD2Q9HC29 1040 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 EURLQ9NYK6 297 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 BAIAP2L1Q9UHR4 511 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 ZNF214Q9UL59 606 aaPredicted RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 ABHD2P08910 425 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 RPS12P25398 132 aaKnown RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 NCALDP61601 193 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 TMEM132BQ14DG7 1078 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 TMED2Q15363 201 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 TMEM63BQ5T3F8 832 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 PPP1R21Q6ZMI0 780 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 PNMA8AQ86V59 439 aaPredicted RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 CCHCR1Q8TD31 782 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 RBM41Q96IZ5 413 aaKnown RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 FHDC1Q9C0D6 1143 aaPredicted RBP26.78■■□□□ 1.88
C9orf40-201ENST00000376854 ECT2Q9H8V3 914 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 CYP39A1Q9NYL5 469 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 FBXO40Q9UH90 709 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 DNPEPQ9ULA0 475 aa26.78■■□□□ 1.88
C9orf40-201ENST00000376854 RLFQ13129 1914 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 RASA4BC9J798 803 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 RASA4O43374 803 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 TCF4P15884 667 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 ATF7P17544 494 aaPredicted RBP26.77■■□□□ 1.88
C9orf40-201ENST00000376854 ATP4AP20648 1035 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 TGFB2P61812 414 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 NCOA4Q13772 614 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 GLIS1Q8NBF1 620 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 SLC16A10Q8TF71 515 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 ZNF606Q8WXB4 792 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 CFAP57Q96MR6 1250 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 SLITRK1Q96PX8 696 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 PLCD4Q9BRC7 762 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 SAYSD1Q9NPB0 183 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 ZNF148Q9UQR1 794 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 DOCK1Q14185 1865 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 A0A0B4J269 797 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 KRT1P04264 644 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 MMP8P22894 467 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 OAZ1P54368 228 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 ANKRD35Q8N283 1001 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 RIBC1Q8N443 379 aaPredicted RBP26.77■■□□□ 1.88
C9orf40-201ENST00000376854 PRKAG3Q9UGI9 489 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 KIAA1217Q5T5P2 1943 aa26.77■■□□□ 1.88
C9orf40-201ENST00000376854 BAG6P46379 1132 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 SP2Q02086 613 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 ZNF526Q8TF50 670 aaPredicted RBP26.76■■□□□ 1.87
C9orf40-201ENST00000376854 ZNF302Q9NR11 478 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 CNTNAP2Q9UHC6 1331 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 TMEM191CA6NGB0 347 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 DNALI1O14645 258 aaPredicted RBP26.76■■□□□ 1.87
C9orf40-201ENST00000376854 TJP3O95049 919 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 OATP04181 439 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 TMEM191BP0C7N4 346 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 ZSCAN5DPP0CG00 497 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 NF2P35240 595 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 BNIP1Q12981 228 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 SEZ6Q53EL9 994 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 EAPPQ56P03 285 aaPredicted RBP26.76■■□□□ 1.87
C9orf40-201ENST00000376854 MFSD7Q6UXD7 560 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 MAML1Q92585 1016 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 KCNN1Q92952 543 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 DHX33Q9H6R0 707 aaKnown RBP26.76■■□□□ 1.87
C9orf40-201ENST00000376854 PICK1Q9NRD5 415 aa26.76■■□□□ 1.87
C9orf40-201ENST00000376854 EXOC1LA0A1B0GW35 172 aa26.75■■□□□ 1.87
C9orf40-201ENST00000376854 STAM2O75886 525 aa26.75■■□□□ 1.87
C9orf40-201ENST00000376854 HARSP12081 509 aaKnown RBP26.75■■□□□ 1.87
C9orf40-201ENST00000376854 COPS2P61201 443 aa26.75■■□□□ 1.87
C9orf40-201ENST00000376854 E2F5Q15329 346 aa26.75■■□□□ 1.87
C9orf40-201ENST00000376854 MAFBQ9Y5Q3 323 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms