RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SNX1Q13596 522 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 CDT1Q9H211 546 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 RPF1Q9H9Y2 349 aaKnown RBP21.48■■□□□ 1.03
VSX1-202ENST00000376709 TNFSF13BQ9Y275 285 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 ANK1P16157 1881 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 B4GALT4O60513 344 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 PPFIA4O75335 1185 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 LSM8O95777 96 aaKnown RBP21.48■■□□□ 1.03
VSX1-202ENST00000376709 KRT19P08727 400 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 CXCL8P10145 99 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 ZNF484Q5JVG2 852 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 TAPT1Q6NXT6 567 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 FEZF2Q8TBJ5 459 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 PRMT7Q9NVM4 692 aaPredicted RBP21.48■■□□□ 1.03
VSX1-202ENST00000376709 MGAMO43451 1857 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 GJB6O95452 261 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 IQCF3P0C7M6 154 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 GJC1P36383 396 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 EIF3BP55884 814 aaKnown RBP21.47■■□□□ 1.03
VSX1-202ENST00000376709 KRT71Q3SY84 523 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 ANKRD23Q86SG2 305 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 PPP1R16BQ96T49 567 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 PABPC3Q9H361 631 aaKnown RBP21.47■■□□□ 1.03
VSX1-202ENST00000376709 IL18RAPO95256 599 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 GH1P01241 217 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 CALB1P05937 261 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 SKIDA1Q1XH10 827 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 TMEM35BQ8NCS4 154 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 ATG4AQ8WYN0 398 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 NFKBIZQ9BYH8 718 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 XYLT2Q9H1B5 865 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 RABEP2Q9H5N1 569 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 IFT122Q9HBG6 1241 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 NXF1Q9UBU9 619 aaKnown RBP21.47■■□□□ 1.03
VSX1-202ENST00000376709 IP6K2Q9UHH9 426 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 RSPH14Q9UHP6 348 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 AKT3Q9Y243 479 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 CEP83Q9Y592 693 aa21.47■■□□□ 1.03
VSX1-202ENST00000376709 O00370 1275 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 CSDE1O75534 798 aaKnown RBP21.46■■□□□ 1.03
VSX1-202ENST00000376709 CELF2O95319 508 aaKnown RBP21.46■■□□□ 1.03
VSX1-202ENST00000376709 RALAP11233 206 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 ASPAP45381 313 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 TAS2R40P59535 323 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 KRT17Q04695 432 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 CALCOCO2Q13137 446 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 ODF2Q5BJF6 829 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 EMC10Q5UCC4 262 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 DENND2CQ68D51 928 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 TMEM192Q8IY95 271 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 SLCO2A1Q92959 643 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 VTA1Q9NP79 307 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 CHST7Q9NS84 486 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 IVNS1ABPQ9Y6Y0 642 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 ZEB2O60315 1214 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 MAN1A1P33908 653 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 YWHAEP62258 255 aaKnown RBP21.46■■□□□ 1.03
VSX1-202ENST00000376709 RPL7AP62424 266 aaKnown RBP21.46■■□□□ 1.03
VSX1-202ENST00000376709 ARFGAP2Q8N6H7 521 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 HEMGNQ9BXL5 484 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 MORF4L1Q9UBU8 362 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 LCMT1Q9UIC8 334 aa21.46■■□□□ 1.03
VSX1-202ENST00000376709 A0A087WZ62 844 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 ZNF286BP0CG31 522 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 GCLCP48506 637 aaPredicted RBP21.45■■□□□ 1.02
VSX1-202ENST00000376709 LACTBP83111 547 aaPredicted RBP21.45■■□□□ 1.02
VSX1-202ENST00000376709 GUCY1A3Q02108 690 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 DNAJC24Q6P3W2 148 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 MAMDC4Q6UXC1 1216 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 KATNAL2Q8IYT4 538 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 PPTC7Q8NI37 304 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 BCAS4Q8TDM0 211 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 AFG1LQ8WV93 481 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 FDXACB1Q9BRP7 624 aaPredicted RBP21.45■■□□□ 1.02
VSX1-202ENST00000376709 HERPUD2Q9BSE4 406 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 ZNF518BQ9C0D4 1074 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 ASIC3Q9UHC3 531 aa21.45■■□□□ 1.02
VSX1-202ENST00000376709 MAGEB2O15479 319 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 FKBP1BP68106 108 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 ZFYVE27Q5T4F4 411 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 SPRYD7Q5W111 196 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 DCUN1D2Q6PH85 259 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 C2orf69Q8N8R5 385 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 GRK7Q8WTQ7 553 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 ART4Q93070 314 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 CCDC114Q96M63 670 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 MCEEQ96PE7 176 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 PTPN18Q99952 460 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.44■■□□□ 1.02
VSX1-202ENST00000376709 GPR25O00155 361 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 GAS8O95995 478 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 TMOD1P28289 359 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 ADCYAP1R1P41586 468 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 AGBL2Q5U5Z8 902 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 TFAP2BQ92481 460 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 FAM129AQ9BZQ8 928 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 DCLK3Q9C098 648 aa21.44■■□□□ 1.02
VSX1-202ENST00000376709 FEZ2Q9UHY8 353 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms