RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 TOM1L1O75674 476 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 ADSSP30520 456 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 ZNF844Q08AG5 666 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 SGSM1Q2NKQ1 1148 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 FYB2Q5VWT5 728 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 EPM2AIP1Q7L775 607 aaPredicted RBP13.11□□□□□ -0.31
DDR1-224ENST00000376567 CDCA5Q96FF9 252 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 FAM81BQ96LP2 452 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 SMARCAD1Q9H4L7 1026 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
DDR1-224ENST00000376567 DIS3Q9Y2L1 958 aaKnown RBP13.11□□□□□ -0.31
DDR1-224ENST00000376567 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 OGTO15294 1046 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 SUN1O94901 812 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 SLC4A1P02730 911 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 MT-ND3P03897 115 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 EIF3EP60228 445 aaKnown RBP13.1□□□□□ -0.31
DDR1-224ENST00000376567 PLCB4Q15147 1175 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 EEF1DP3Q658K8 133 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 DCLK2Q8N568 766 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CAMKK2Q96RR4 588 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 NEU2Q9Y3R4 380 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
DDR1-224ENST00000376567 SDC4P31431 198 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 BCAR1P56945 870 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 PDE1BQ01064 536 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 IL9RQ01113 521 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 ITKQ08881 620 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 PRELID2Q8N945 189 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CHST13Q8NET6 341 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CFAP57Q96MR6 1250 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 EPN3Q9H201 632 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
DDR1-224ENST00000376567 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 RBP3P10745 1247 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 AKAP5P24588 427 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 PHBP35232 272 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 ADCYAP1R1P41586 468 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 NAMPTP43490 491 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 LMNB2Q03252 620 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
DDR1-224ENST00000376567 TMEM132DQ14C87 1099 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 NAA25Q14CX7 972 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
DDR1-224ENST00000376567 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 OSMRQ99650 979 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDR1-224ENST00000376567 ZNF536O15090 1300 aa13.1□□□□□ -0.31
DDR1-224ENST00000376567 H0Y3Z8 333 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 P4HA2O15460 535 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 PTENP60484 403 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 TMC3Q7Z5M5 1100 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 SCFD2Q8WU76 684 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 TIPINQ9BVW5 301 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 RAB6BQ9NRW1 208 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CPP00450 1065 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CAPSQ13938 189 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 PTGISQ16647 500 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 COBLL1Q53SF7 1204 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 IER5Q5VY09 327 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 KCNN4O15554 427 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 SLC26A4O43511 780 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 BANF1O75531 89 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CFHP08603 1231 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 GARTP22102 1010 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 SESN2P58004 480 aaPredicted RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 ZRSR2Q15696 482 aaKnown RBP13.09□□□□□ -0.31
DDR1-224ENST00000376567 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CFAP157Q5JU67 520 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 CROCCP2Q86T23 111 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
DDR1-224ENST00000376567 AGR3Q8TD06 166 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms