RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 DLG4P78352 724 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 EFCAB13Q8IY85 973 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SLC7A14Q8TBB6 771 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SEPT5Q99719 369 aaPredicted RBP18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 UBIAD1Q9Y5Z9 338 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 PCK1P35558 622 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 SV2CQ496J9 727 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 RIOX2Q8IUF8 465 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 PPP1R12CQ9BZL4 782 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 SLC13A1Q9BZW2 595 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 ABCF3Q9NUQ8 709 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 SLC38A7Q9NVC3 462 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 INTS13Q9NVM9 706 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 TIMM13Q9Y5L4 95 aaPredicted RBP18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 CYP3A7-CYP3A51PA0A087WV96 503 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 KRT10P13645 584 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 CYP3A7P24462 503 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 DEUP1Q05D60 604 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 TERF2Q15554 542 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 MGAT5BQ3V5L5 792 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 TARSL2A2RTX5 802 aaKnown RBP18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 LRRC10BA6NIK2 292 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 ADAMTS3O15072 1205 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 EPHB6O15197 1021 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 PCSK1P29120 753 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 OR6P1Q8NGX9 317 aa18.91■□□□□ 0.62
PTPDC1-202ENST00000375360 GOLGA8RI6L899 631 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 COPEO14579 308 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 PHF2O75151 1096 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 CAV1Q03135 178 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 ITGB3BPQ13352 177 aaPredicted RBP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 BYSLQ13895 437 aaKnown RBP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 RBM15Q96T37 977 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 ABI2Q9NYB9 513 aaPredicted RBP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 TRPA1O75762 1119 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 PPP3CAQ08209 521 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 HIF1AQ16665 826 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 MED15Q96RN5 788 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 PLEKHA5Q9HAU0 1116 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 LCMT1Q9UIC8 334 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 CALCAP01258 141 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 NCAM1P13591 858 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 TLK2Q86UE8 772 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 ZNF677Q86XU0 584 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 PITPNM3Q9BZ71 974 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 EGFRP00533 1210 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 KYNUQ16719 465 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 ZNF512Q96ME7 567 aaPredicted RBP18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 EPAS1Q99814 870 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 DONSONQ9NYP3 566 aa18.9■□□□□ 0.62
PTPDC1-202ENST00000375360 A0A0U1RQJ8 604 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 SPAG7O75391 227 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 GJB1P08034 283 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 PPIL2Q13356 520 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 KRT38O76015 456 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 HSD17B4P51659 736 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 TPD52P55327 224 aaPredicted RBP18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 UGCGQ16739 394 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 EPM2AIP1Q7L775 607 aaPredicted RBP18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 CARD9Q9H257 536 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 TMPRSS15P98073 1019 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 MAML1Q92585 1016 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 PNKPQ96T60 521 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 L2HGDHQ9H9P8 463 aa18.89■□□□□ 0.61
PTPDC1-202ENST00000375360 SLC12A1Q13621 1099 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 SP110Q9HB58 689 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 ALG13Q9NP73 1137 aaKnown RBP18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 GPD1P21695 349 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 SESN3P58005 492 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 TBX2Q13207 712 aaPredicted RBP18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 ZNF449Q6P9G9 518 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 LRRC55Q6ZSA7 311 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 ASAP3Q8TDY4 903 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 VPS39Q96JC1 886 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 LGALS2P05162 132 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 FAM200BP0CF97 657 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 GHRP10912 638 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 GTF2A1P52655 376 aaPredicted RBP18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 COG7P83436 770 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 MYBPC2Q14324 1141 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 VEPH1Q14D04 833 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 DCAF4L1Q3SXM0 396 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 SLC13A5Q86YT5 568 aaPredicted RBP18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 FGFBP2Q9BYJ0 223 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 TJP2Q9UDY2 1190 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 INTUQ9ULD6 942 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 A0A0G2JND7 137 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 GTPBP10A4D1E9 387 aaKnown RBP18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 BAG2O95816 211 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 HPCAL4Q9UM19 191 aa18.88■□□□□ 0.61
PTPDC1-202ENST00000375360 CASTOR2A6NHX0 329 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ACKR2O00590 384 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms