RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 OR5B17Q8NGF7 314 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ATL2Q8NHH9 583 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 R3HDMLQ9H3Y0 253 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 APOBEC3GQ9HC16 384 aaKnown RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ANAPC7Q9UJX3 599 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 TNFSF13BQ9Y275 285 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 NUB1Q9Y5A7 615 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 MCM3APO60318 1980 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 INO80B-WBP1J3KQ70 363 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 TTI1O43156 1089 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 THAP12O43422 761 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 FAM189A1O60320 539 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 B4GALT4O60513 344 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 PYGLP06737 847 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 GUCY2FP51841 1108 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ARHGAP1Q07960 439 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 FAM187BQ17R55 369 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 SLC5A9Q2M3M2 681 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 TBC1D25Q3MII6 688 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 SPDYCQ5MJ68 293 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 NAA35Q5VZE5 725 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 PHF13Q86YI8 300 aaPredicted RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 NLRP4Q96MN2 994 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 INO80BQ9C086 356 aaPredicted RBP8.73□□□□□ -1.01
UBR4-202ENST00000375224 NIF3L1Q9GZT8 377 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 MORF4L1Q9UBU8 362 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 PCYOX1Q9UHG3 505 aa8.73□□□□□ -1.01
UBR4-202ENST00000375224 PDHXO00330 501 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 FAM153BP0C7A2 387 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CYP2C8P10632 490 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 FAM153CQ494X1 144 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 MON1BQ7L1V2 547 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 SLC13A5Q86YT5 568 aaPredicted RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 PPTC7Q8NI37 304 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 KRT35Q92764 455 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 COPS5Q92905 334 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 ZIM3Q96PE6 472 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 FAM129AQ9BZQ8 928 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 ZNF518BQ9C0D4 1074 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 RPF1Q9H9Y2 349 aaKnown RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 PTPRHQ9HD43 1115 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 ADAM22Q9P0K1 906 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 FAM153AQ9UHL3 310 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 ABLIM1O14639 778 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 LGALS2P05162 132 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CALB1P05937 261 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 IMPDH2P12268 514 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 ADORA2AP29274 412 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 MAN1A1P33908 653 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 TNFSF9P41273 254 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CD151P48509 253 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 NOMO3P69849 1222 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 PTP4A2Q12974 167 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CYP1B1Q16678 543 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 CPA5Q8WXQ8 436 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 MAGOHBQ96A72 148 aaKnown RBP8.72□□□□□ -1.01
UBR4-202ENST00000375224 CYFIP2Q96F07 1278 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CCDC114Q96M63 670 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 PDGFCQ9NRA1 345 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 PLXNA1Q9UIW2 1896 aa8.72□□□□□ -1.01
UBR4-202ENST00000375224 CCL15-CCL14A0A0B4J2E2 113 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 DAPK3O43293 454 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 C22orf31O95567 290 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 CETN2P41208 172 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 CCT5P48643 541 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 FNTAP49354 379 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 ZNF132P52740 706 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 CCL15Q16663 113 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 TRIM42Q8IWZ5 723 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 UBR7Q8N806 425 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 MTMR12Q9C0I1 747 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 PARVAQ9NVD7 372 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 PLXNB2O15031 1838 aa8.71□□□□□ -1.01
UBR4-202ENST00000375224 ZEB2O60315 1214 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 PROSCO94903 275 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 MCF2P10911 925 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 PYGMP11217 842 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 INSRRP14616 1297 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 RRM1P23921 792 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 TFAMQ00059 246 aaKnown RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 ZNF699Q32M78 642 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 LRRC23Q53EV4 343 aaPredicted RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 DUPD1Q68J44 220 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 MAMDC4Q6UXC1 1216 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 C12orf50Q8NA57 414 aaPredicted RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 MIPOL1Q8TD10 442 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms