RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 HAUS4Q9H6D7 363 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 PCDHB4Q9Y5E5 795 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 SNX9Q9Y5X1 595 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 TSC2P49815 1807 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 CILPO75339 1184 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 DDHD2O94830 711 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 LCA5LO95447 670 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 WEE2P0C1S8 567 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 ACRP10323 421 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 RAP1GAPP47736 663 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 BPIFB4P59827 614 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 DEFB103AP81534 67 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 ARID5AQ03989 594 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 MTF1Q14872 753 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 TMEM270Q6UE05 265 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 CD300LGQ6UXG3 332 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 DPH6Q7L8W6 267 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZNF571Q7Z3V5 609 aaPredicted RBP18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZNF280BQ86YH2 543 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 GPIHBP1Q8IV16 184 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 SPATA18Q8TC71 538 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 PAAF1Q9BRP4 392 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 TMEM175Q9BSA9 504 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 KCND1Q9NSA2 647 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 BARX2Q9UMQ3 279 aaPredicted RBP18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 NENFQ9UMX5 172 aa18.41■□□□□ 0.54
HLA-DMA-201ENST00000374843 EIF3CLB5ME19 914 aaKnown RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 NDUFA10O95299 355 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 PAEPP09466 180 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 CYP11B1P15538 503 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 CYLC1P35663 651 aaPredicted RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 PDE6CP51160 858 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 KIF11P52732 1056 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 EPHB4P54760 987 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 SOWAHAQ2M3V2 549 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 DCLRE1AQ6PJP8 1040 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 NOP9Q86U38 636 aaKnown RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 SLC47A2Q86VL8 602 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZSCAN30Q86W11 494 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZNF677Q86XU0 584 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 KIAA1524Q8TCG1 905 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 WHAMMQ8TF30 809 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 KBTBD7Q8WVZ9 684 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 DDX1Q92499 740 aaKnown RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZNF689Q96CS4 500 aaPredicted RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 CCDC42Q96M95 316 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 EIF3CQ99613 913 aaKnown RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 NRDE2Q9H7Z3 1164 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 L1RE1Q9UN81 338 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 EPN1Q9Y6I3 576 aaPredicted RBP18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 PTPRSQ13332 1948 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 ATP8B3O60423 1300 aa18.4■□□□□ 0.54
HLA-DMA-201ENST00000374843 TBKBP1A7MCY6 615 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 KIF4AO95239 1232 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 CD58P19256 250 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 WARSP23381 471 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 USP8P40818 1118 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 CDH8P55286 799 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 RNASELQ05823 741 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 BMS1Q14692 1282 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 TOGARAM2Q6ZUX3 1019 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 UNC93AQ86WB7 457 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 CMTR2Q8IYT2 770 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 HERVK_113Q902F9 699 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 MMS19Q96T76 1030 aa18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 MRPL45Q9BRJ2 306 aaKnown RBP18.39■□□□□ 0.53
HLA-DMA-201ENST00000374843 M0QZQ0 153 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 HUS1O60921 280 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 B3GAT3O94766 335 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 FGBP02675 491 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 CYP11A1P05108 521 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 IGFBP6P24592 240 aaPredicted RBP18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 RAD23BP54727 409 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 CDR2Q01850 454 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 VPS36Q86VN1 386 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 ADGRF2Q8IZF7 708 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 TMEM86AQ8N2M4 240 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 PDCL2Q8N4E4 241 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 APPL2Q8NEU8 664 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC30A5Q8TAD4 765 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC20A1Q8WUM9 679 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 SUSD3Q96L08 255 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 SENP8Q96LD8 212 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 FAM193BQ96PV7 902 aaPredicted RBP18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 TWNKQ96RR1 684 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 AGPAT1Q99943 283 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 ELOVL4Q9GZR5 314 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 DNAJB4Q9UDY4 337 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
HLA-DMA-201ENST00000374843 ARHGEF37A1IGU5 675 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 DDX3XO00571 662 aaKnown RBP eCLIP18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 CYB561D2O14569 222 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 GABRDO14764 452 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms