RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RBM43Q6ZSC3 357 aaKnown RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 LRRTM3Q86VH5 581 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 C1orf210Q8IVY1 113 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ANKRD35Q8N283 1001 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 VGLL2Q8N8G2 317 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 PCED1AQ9H1Q7 454 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 ZSCAN16Q9H4T2 348 aaPredicted RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 ZNF703Q9H7S9 590 aaPredicted RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 ZMAT4Q9H898 229 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 DDX19AQ9NUU7 478 aaKnown RBP5.52□□□□□ -1.53
USP48-202ENST00000374730 FANCLQ9NW38 375 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 RIPOR2Q9Y4F9 1068 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 RTL9Q8NET4 1388 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 MYH13Q9UKX3 1938 aa5.52□□□□□ -1.53
USP48-202ENST00000374730 COL24A1Q17RW2 1714 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ZMYM6O95789 1325 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ANKRD18BA2A2Z9 1011 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 EXOC5O00471 708 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ENPP3O14638 875 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PLSCR1O15162 318 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PDE8AO60658 829 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 JAK2O60674 1132 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 KPNA6O60684 536 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PRPF6O94906 941 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 VSIG10L2P0DP72 767 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 IBSPP21815 317 aaPredicted RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 CD40P25942 277 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 STAT3P40763 770 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 IGBP1P78318 339 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 STK3Q13188 491 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 HLFQ16534 295 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 IMMTQ16891 758 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 TKFCQ3LXA3 575 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 GORABQ5T7V8 394 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 CCDC181Q5TID7 509 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ATL3Q6DD88 541 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 SGMS1Q86VZ5 419 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PASD1Q8IV76 773 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ZNF34Q8IZ26 560 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PPM1KQ8N3J5 372 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PLA2G15Q8NCC3 412 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 NSUN7Q8NE18 718 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 CACTINQ8WUQ7 758 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 LEO1Q8WVC0 666 aaPredicted RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 ZNF274Q96GC6 653 aaPredicted RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 TMEM176AQ96HP8 235 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 GPHA2Q96T91 129 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 OSBPL6Q9BZF3 934 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.51□□□□□ -1.531e-11■■□□□ 13.7
USP48-202ENST00000374730 MTG2Q9H4K7 406 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 USP36Q9P275 1121 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 SYNPO2Q9UMS6 1093 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 PLAAQ9Y263 795 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 ZBTB1Q9Y2K1 713 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 THRAP3Q9Y2W1 955 aaKnown RBP5.51□□□□□ -1.53
USP48-202ENST00000374730 SH3BP1Q9Y3L3 701 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 MAST2Q6P0Q8 1798 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 KIAA1551Q9HCM1 1747 aa5.51□□□□□ -1.53
USP48-202ENST00000374730 SPATA31A1Q5TZJ5 1347 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 UBN2Q6ZU65 1347 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MROH5Q6ZUA9 1318 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MYH6P13533 1939 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 DLEC1Q9Y238 1755 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 hCG_2014768A0A024R1R8 64 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 NPIPB8E9PQR5 432 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 H3BQV1 296 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MTSS1O43312 755 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MARCH6O60337 910 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 OFD1O75665 1012 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 ZNF202O95125 648 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 PDE8BO95263 885 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 CTDNEP1O95476 244 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 JUNP05412 331 aaKnown RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 UQCRFS1P1P0C7P4 283 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 CCDC192P0DO97 292 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 ADD2P35612 726 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 HMGA2P52926 109 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 EIF5P55010 431 aaKnown RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 UBE3CQ15386 1083 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MAN2A1Q16706 1144 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 GPR158Q5T848 1215 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 SPTY2D1Q68D10 685 aaPredicted RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 LDHAL6AQ6ZMR3 332 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 JAZF1Q86VZ6 243 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 NIM1KQ8IY84 436 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MB21D2Q8IYB1 491 aaPredicted RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 RPL10LQ96L21 214 aaKnown RBP5.5□□□□□ -1.53
USP48-202ENST00000374730 FEZ1Q99689 392 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MYL10Q9BUA6 226 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 MTFR1LQ9H019 292 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 NUP62CLQ9H1M0 184 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 GREM2Q9H772 168 aa5.5□□□□□ -1.53
USP48-202ENST00000374730 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms