RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SERPINB9P50453 376 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 TKFCQ3LXA3 575 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 TRIM67Q6ZTA4 783 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 NLRP9Q7RTR0 991 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 PAK5Q9P286 719 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 ENO4A6NNW6 628 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 PIK3R2O00459 728 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 RBP3P10745 1247 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 PAMP19021 973 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 OCRLQ01968 901 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 GTSE1Q9NYZ3 720 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 ZFATQ9P243 1243 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 FAM86B1E9PN63 330 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 ZC3H11AO75152 810 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 FAM86B2P0C5J1 330 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 FGRP09769 529 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 PYGMP11217 842 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 RABGAP1LQ5R372 815 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 C1orf131Q8NDD1 294 aaKnown RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 THTPAQ9BU02 230 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 TRIM15Q9C019 465 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 VHLP40337 213 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 CASP2P42575 452 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 SERPINB4P48594 390 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 CCNG2Q16589 344 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 CLEC16AQ2KHT3 1053 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 ARHGEF19Q8IW93 802 aa18.28■□□□□ 0.52
PTPRU-202ENST00000373779 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 MRPL40Q9NQ50 206 aaKnown RBP18.28■□□□□ 0.52
PTPRU-202ENST00000373779 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
PTPRU-202ENST00000373779 NFAT5O94916 1531 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 PROSCO94903 275 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 OVGP1Q12889 678 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 RWDD4Q6NW29 188 aaKnown RBP18.27■□□□□ 0.52
PTPRU-202ENST00000373779 FAM71DQ8N9W8 422 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 TAS1R2Q8TE23 839 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 STAP1Q9ULZ2 295 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
PTPRU-202ENST00000373779 DNAJC8O75937 253 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-202ENST00000373779 GRM1Q13255 1194 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 TMED1Q13445 227 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 CYP4A22Q5TCH4 519 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 CCNYL1Q8N7R7 359 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 TMC2Q8TDI7 906 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 TAAR1Q96RJ0 339 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 POP1Q99575 1024 aaKnown RBP18.27■□□□□ 0.52
PTPRU-202ENST00000373779 MTBPQ96DY7 904 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 TRPV6Q9H1D0 765 aa18.27■□□□□ 0.52
PTPRU-202ENST00000373779 H3BRJ5 948 aa18.27■□□□□ 0.51
PTPRU-202ENST00000373779 SESN2P58004 480 aaPredicted RBP18.27■□□□□ 0.51
PTPRU-202ENST00000373779 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.51
PTPRU-202ENST00000373779 DAB2IPQ5VWQ8 1189 aa18.27■□□□□ 0.51
PTPRU-202ENST00000373779 SLC30A9Q6PML9 568 aa18.27■□□□□ 0.51
PTPRU-202ENST00000373779 NID2Q14112 1375 aa18.27■□□□□ 0.51
PTPRU-202ENST00000373779 MAFGO15525 162 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 ICAM1P05362 532 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 ADORA2BP29275 332 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 NAALADL1Q9UQQ1 740 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 SETSIPP0DME0 302 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 NPTX2P47972 431 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 BBS5Q8N3I7 341 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 CYP2W1Q8TAV3 490 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 HAS1Q92839 578 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 MMTAG2Q9BU76 263 aaKnown RBP18.26■□□□□ 0.51
PTPRU-202ENST00000373779 GGA2Q9UJY4 613 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 KIF1AQ12756 1690 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 RARAP10276 462 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 CASP5P51878 434 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 KIF19Q2TAC6 998 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
PTPRU-202ENST00000373779 EXD1Q8NHP7 514 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 E2F7Q96AV8 911 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 GJD4Q96KN9 370 aaPredicted RBP18.26■□□□□ 0.51
PTPRU-202ENST00000373779 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 PCDHA3Q9Y5H8 950 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
PTPRU-202ENST00000373779 EVX2Q03828 476 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 MORF4L2Q15014 288 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 DALRD3Q5D0E6 543 aaKnown RBP18.26■□□□□ 0.51
PTPRU-202ENST00000373779 EFHC2Q5JST6 749 aa18.26■□□□□ 0.51
PTPRU-202ENST00000373779 SLITRK3O94933 977 aa18.25■□□□□ 0.51
PTPRU-202ENST00000373779 S100BP04271 92 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-202ENST00000373779 CHRNA5P30532 468 aa18.25■□□□□ 0.51
PTPRU-202ENST00000373779 HMGCS2P54868 508 aa18.25■□□□□ 0.51
PTPRU-202ENST00000373779 NBPF20Q3BBV1 942 aa18.25■□□□□ 0.51
PTPRU-202ENST00000373779 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-202ENST00000373779 CEP70Q8NHQ1 597 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms