RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 SPATA7Q9P0W8 599 aa12.76□□□□□ -0.37
NCDN-202ENST00000373243 DYTNA2CJ06 578 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 LSM1O15116 133 aaKnown RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 GGPS1O95749 300 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 TTC4O95801 387 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 VIL1P09327 827 aaKnown RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 ZNF24P17028 368 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 PHBP35232 272 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 PGM2Q96G03 612 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 TAAR1Q96RJ0 339 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 UBAP1Q9NZ09 502 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 NKX1-2Q9UD57 310 aaPredicted RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 I3L4J1 428 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 SNX3O60493 162 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 GSTA1P08263 222 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 CDR2Q01850 454 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
NCDN-202ENST00000373243 HSD17B14Q9BPX1 270 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 SLCO1B3Q9NPD5 702 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 MARCOQ9UEW3 520 aaPredicted RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 ESRRAP11474 423 aaPredicted RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 SH2D4BQ5SQS7 431 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 ACAD10Q6JQN1 1059 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 SLC7A3Q8WY07 619 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 P2RX7Q99572 595 aaKnown RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 SLC13A1Q9BZW2 595 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 DMAP1Q9NPF5 467 aaPredicted RBP12.75□□□□□ -0.37
NCDN-202ENST00000373243 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 SNED1Q8TER0 1413 aa12.75□□□□□ -0.37
NCDN-202ENST00000373243 GYG2O15488 501 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 TJP3O95049 919 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 ETS1P14921 441 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 RFX1P22670 979 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 PSMA2P25787 234 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 PSMC5P62195 406 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 LMNB2Q03252 620 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 HYIQ5T013 277 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 MOXD1Q6UVY6 613 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 MCEEQ96PE7 176 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 HLA-DRAP01903 254 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 VCAM1P19320 739 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 TAF1P21675 1872 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 RARRES1P49788 294 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 SPP2Q13103 211 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 MAP7Q14244 749 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 PDIK1LQ8N165 341 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 PRM3Q9NNZ6 103 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 VAV3Q9UKW4 847 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 CIB2O75838 187 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 ADRB2P07550 413 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 SKIP12755 728 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 ATP6V1C1P21283 382 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 ORC1Q13415 861 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 CYP4A22Q5TCH4 519 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 DARS2Q6PI48 645 aaKnown RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 TSHZ1Q6ZSZ6 1077 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 FAM160B2Q86V87 743 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 RASGEF1CQ8N431 466 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 INO80BQ9C086 356 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 PPARGC1AQ9UBK2 798 aaKnown RBP12.74□□□□□ -0.37
NCDN-202ENST00000373243 SUGT1Q9Y2Z0 365 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
NCDN-202ENST00000373243 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 SYNJ2BP-COX16A0A087WUM0 186 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 H0YGN5 161 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 E2F6O75461 281 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 CBX6O95503 412 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 ALOX15P16050 662 aaPredicted RBP12.73□□□□□ -0.37
NCDN-202ENST00000373243 NPTX2P47972 431 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 CD151P48509 253 aa12.73□□□□□ -0.37
NCDN-202ENST00000373243 RPS6P62753 249 aaKnown RBP12.73□□□□□ -0.37
NCDN-202ENST00000373243 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
NCDN-202ENST00000373243 ALCAMQ13740 583 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms