RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PYDC1Q8WXC3 89 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 TAMM41Q96BW9 452 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 SENP6Q9GZR1 1112 aaPredicted RBP11.21□□□□□ -0.61
TRERF1-203ENST00000372917 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ZNF287Q9HBT7 754 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ZNHIT2Q9UHR6 403 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 TMEM59LQ9UK28 342 aa11.21□□□□□ -0.61
TRERF1-203ENST00000372917 ADAMTS13Q76LX8 1427 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 A0A088AWK7 358 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 A0A0G2JND7 137 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 UBE2Q2LH0YL09 131 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 H3BUI4 141 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 TNPO2O14787 897 aaKnown RBP11.21□□□□□ -0.62
TRERF1-203ENST00000372917 ACSL4O60488 711 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 CASP5P51878 434 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 DR1Q01658 176 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 ITGADQ13349 1161 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 BBS9Q3SYG4 887 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 APOA5Q6Q788 366 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 CLNKQ7Z7G1 428 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 MRPS26Q9BYN8 205 aaKnown RBP11.21□□□□□ -0.62
TRERF1-203ENST00000372917 UCKL1Q9NWZ5 548 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.62
TRERF1-203ENST00000372917 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.62
TRERF1-203ENST00000372917 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.62
TRERF1-203ENST00000372917 J3QRK9 145 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PIK3CDO00329 1044 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 STARD3NLO95772 234 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 THOP1P52888 689 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 CEP78Q5JTW2 689 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SPDYCQ5MJ68 293 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 UGT2A3Q6UWM9 527 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 MMAAQ8IVH4 418 aaKnown RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 GDPD5Q8WTR4 605 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 FBXL8Q96CD0 374 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 CLPTM1LQ96KA5 538 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 UQCC2Q9BRT2 126 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 THTPAQ9BU02 230 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 CRNNQ9UBG3 495 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 ARMCX3Q9UH62 379 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PCDHGA11Q9Y5H2 935 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PJA2O43164 708 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 EPS15P42566 896 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 NKX2-5P52952 324 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 RBM38Q9H0Z9 239 aaKnown RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 THAP1Q9NVV9 213 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 STARD13Q9Y3M8 1113 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 TAF4O00268 1085 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 KLHL41O60662 606 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SNX2O60749 519 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 P4HA1P13674 534 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PTPN2P17706 415 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PEX2P28328 305 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 MCM7P33993 719 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 NCKAP1LP55160 1127 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 METTL13Q8N6R0 699 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SLC26A7Q8TE54 656 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
TRERF1-203ENST00000372917 HAUS8Q9BT25 410 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 CYLDQ9NQC7 956 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SAR1AQ9NR31 198 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 TAS2R1Q9NYW7 299 aa11.2□□□□□ -0.62
TRERF1-203ENST00000372917 SYCE1LA8MT33 242 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 KCNJ13O60928 360 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 ESRRBO95718 433 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 BMP15O95972 392 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 TOB1P50616 345 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 TMC7Q7Z402 723 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 FERMT1Q9BQL6 677 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 PUS7LQ9H0K6 701 aaKnown RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 HMGXB4Q9UGU5 601 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 ARPC4-TTLL3A0A0A6YYG9 625 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 ITM2AO43736 263 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 FGGP02679 453 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 KRT10P13645 584 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 SLC1A1P43005 524 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 SLC9C1Q4G0N8 1177 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 ZNF658Q5TYW1 1059 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 ZCCHC8Q6NZY4 707 aaKnown RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 AAGABQ6PD74 315 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 DDI1Q8WTU0 396 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
TRERF1-203ENST00000372917 CNOT6LQ96LI5 555 aaKnown RBP11.19□□□□□ -0.62
TRERF1-203ENST00000372917 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms