RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZKSCAN8Q15776 578 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ENOX2Q16206 610 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CYP1B1Q16678 543 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ARSHQ5FYA8 562 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 C1orf53Q5VUE5 145 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 TRMT10CQ7L0Y3 403 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SESTD1Q86VW0 696 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 LRRC34Q8IZ02 419 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SLC35G2Q8TBE7 412 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 NACC1Q96RE7 527 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SELENOSQ9BQE4 189 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CELF4Q9BZC1 486 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 NOP53Q9NZM5 478 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 TBC1D7Q9P0N9 293 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 C15orf41Q9Y2V0 281 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 FRMPD3Q5JV73 1810 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 RRN3P2A6NIE6 340 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 PPP1R12AO14974 1030 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 TLR3O15455 904 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SNX3O60493 162 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 WFS1O76024 890 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SUN1O94901 812 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 LYPLA2O95372 231 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 NQO1P15559 274 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CTNNA2P26232 953 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 PTGIRP43119 386 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CCNG1P51959 295 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 IRX1P78414 480 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 MARCH8Q5T0T0 291 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 ANKRD33Q7Z3H0 272 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 UBL4BQ8N7F7 174 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 MDM1Q8TC05 714 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 BORCS6Q96GS4 357 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 SEZ6LQ9BYH1 1024 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 GOLPH3Q9H4A6 298 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 CYP26B1Q9NR63 512 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 GRHL1Q9NZI5 618 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 GCNT4Q9P109 453 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 DNM3Q9UQ16 869 aa12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
TSPAN1-201ENST00000372003 EVI5O60447 810 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 AKAP3O75969 853 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 SHBGP04278 402 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 SATB1Q01826 763 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 E2F5Q15329 346 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 CNGA2Q16280 664 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 DCAF12L1Q5VU92 463 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 C7orf61Q8IZ16 206 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 FAXDC2Q96IV6 333 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 TOX2Q96NM4 488 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 SERPINB12Q96P63 405 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 BHMT2Q9H2M3 363 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
TSPAN1-201ENST00000372003 CCDC189A1A4V9 331 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 RASGRF2O14827 1237 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 RIPK2O43353 540 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 MTA2O94776 668 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 CD4P01730 458 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 CLTBP09497 229 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 MUTP22033 750 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 SCP2P22307 547 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 RARRES1P49788 294 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 ADAM17P78536 824 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 CCDC15Q0P6D6 951 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 BNIP1Q12981 228 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 SLC29A2Q14542 456 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 TARBP2Q15633 366 aaKnown RBP12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 MAEAQ7L5Y9 396 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 LRRC71Q8N4P6 559 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 ART4Q93070 314 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 GRAMD1AQ96CP6 724 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 ANKEF1Q9NU02 776 aa12.17□□□□□ -0.46
TSPAN1-201ENST00000372003 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms