RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 IL18RAPO95256 599 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 CLEC4FQ8N1N0 589 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 KCND2Q9NZV8 630 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 CDYLQ9Y232 598 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ZCCHC11Q5TAX3 1644 aaKnown RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 SRP72O76094 671 aaKnown RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 BRD2P25440 801 aaKnown RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 UGP2Q16851 508 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ACSF2Q96CM8 615 aaPredicted RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 TET3O43151 1660 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 EFCAB14O75071 495 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 GPD1P21695 349 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 SERPINB4P48594 390 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ARHGEF7Q14155 803 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 SV2CQ496J9 727 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 PRR5LQ6MZQ0 368 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 RAD9BQ6WBX8 426 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 MXRA8Q9BRK3 442 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 TMEM8AQ9HCN3 771 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 PKD2L2Q9NZM6 624 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 FAM47DPA6NHR8 397 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ZNF263O14978 683 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 RASA1P20936 1047 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 RFC5P40937 340 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 CYGBQ8WWM9 190 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 RIN2Q8WYP3 895 aaPredicted RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ZC4H2Q9NQZ6 224 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 SELENONQ9NZV5 590 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 USP15Q9Y4E8 981 aaPredicted RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 ITGA8P53708 1063 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 MAP3K10Q02779 954 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 SNX17Q15036 470 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 CYFIP2Q96F07 1278 aa23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
TM9SF3-201ENST00000371142 PGBD3Q8N328 593 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 CCT8L2Q96SF2 557 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 PDS5AQ29RF7 1337 aaKnown RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 SNAPC2Q13487 334 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 STX19Q8N4C7 294 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 APOL5Q9BWW9 433 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 VCPKMTQ9H867 229 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 ZNF229Q9UJW7 825 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 DGKIO75912 1065 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 MAGEA4P43358 317 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 OR1G1P47890 313 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 NEK2P51955 445 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 SGO1Q5FBB7 561 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 PTRHD1Q6GMV3 140 aaKnown RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 CCNI2Q6ZMN8 369 aaPredicted RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 FAM32AQ9Y421 112 aaKnown RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 PMS1P54277 932 aaKnown RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 IL17RAQ96F46 866 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 AGBL1Q96MI9 1066 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 GOLPH3Q9H4A6 298 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 JMJD4Q9H9V9 463 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 IL1RL2Q9HB29 575 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 PAK5Q9P286 719 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 NPTXRO95502 500 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 KCNJ1P48048 391 aa23.16■■□□□ 1.3
TM9SF3-201ENST00000371142 EXTL3O43909 919 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 CST8O60676 142 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 VCAM1P19320 739 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 PLA2G4AP47712 749 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 MAGEB2O15479 319 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 FKBP9O95302 570 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 TTC39BQ5VTQ0 682 aaPredicted RBP23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 FKBP9P1Q75LS8 142 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 FAM162AQ96A26 154 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 THTPAQ9BU02 230 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 ZNF157P51786 506 aaPredicted RBP23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 ANTXR2P58335 489 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 DDX42Q86XP3 938 aaKnown RBP eCLIP23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 SH3BP1Q9Y3L3 701 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 MED21Q13503 144 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 LVRNQ6Q4G3 990 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 FAM71DQ8N9W8 422 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 KRT35Q92764 455 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 CATSPERBQ9H7T0 1116 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 WASHC5Q12768 1159 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 DYNC1I2Q13409 638 aaKnown RBP23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 TC2NQ8N9U0 490 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 C17orf80Q9BSJ5 609 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 PCDHB2Q9Y5E7 798 aa23.15■■□□□ 1.3
TM9SF3-201ENST00000371142 PSMD14O00487 310 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 POLBP06746 335 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 SPRP35270 261 aaPredicted RBP23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 PDK1Q15118 436 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 KYNUQ16719 465 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 MEI1Q5TIA1 1274 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 C16orf89Q6UX73 402 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 BTNL9Q6UXG8 535 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 HS6ST3Q8IZP7 471 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 ENTPD3O75355 529 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 HSPA1AP0DMV8 641 aaKnown RBP23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 HSPA1BP0DMV9 641 aaKnown RBP23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 PCYT1AP49585 367 aa23.14■■□□□ 1.3
TM9SF3-201ENST00000371142 EDRF1Q3B7T1 1238 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms