RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 B3GAT3O94766 335 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 ADRB2P07550 413 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 MRPL58Q14197 206 aaKnown RBP16.43■□□□□ 0.22
SS18L1-202ENST00000370848 KYAT1Q16773 422 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 PPM1LQ5SGD2 360 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 JADE1Q6IE81 842 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 STXBP4Q6ZWJ1 553 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 MTSS1LQ765P7 747 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 NOC3LQ8WTT2 800 aaKnown RBP16.43■□□□□ 0.22
SS18L1-202ENST00000370848 ERCC4Q92889 916 aaPredicted RBP16.43■□□□□ 0.22
SS18L1-202ENST00000370848 FGF13Q92913 245 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 NKD2Q969F2 451 aaPredicted RBP16.43■□□□□ 0.22
SS18L1-202ENST00000370848 SEMA4AQ9H3S1 761 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 SLC38A7Q9NVC3 462 aa16.43■□□□□ 0.22
SS18L1-202ENST00000370848 PATJQ8NI35 1801 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
SS18L1-202ENST00000370848 PPEF2O14830 753 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 SYN3O14994 580 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 CLIC2O15247 247 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 ABLIM3O94929 683 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 GARTP22102 1010 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 OR1D2P34982 312 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 FAM160A1Q05DH4 1040 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 PNOCQ13519 176 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 POSTNQ15063 836 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 ZBTB6Q15916 424 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 FRMD5Q7Z6J6 570 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 CEP57Q86XR8 500 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 EFCAB13Q8IY85 973 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 SLC7A14Q8TBB6 771 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 AGPAT3Q9NRZ7 376 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 UBE4BO95155 1302 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 COL4A2P08572 1712 aa16.42■□□□□ 0.22
SS18L1-202ENST00000370848 MYL1P05976 194 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
SS18L1-202ENST00000370848 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 CBWD2Q8IUF1 395 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 BRSK2Q8IWQ3 736 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 NPAS3Q8IXF0 933 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 PJA1Q8NG27 643 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 ZNF461Q8TAF7 563 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 OSBPL6Q9BZF3 934 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 HSPBP1Q9NZL4 362 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
SS18L1-202ENST00000370848 UBQLN1Q9UMX0 589 aaKnown RBP16.41■□□□□ 0.22
SS18L1-202ENST00000370848 CDY1Q9Y6F8 540 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 MIA3Q5JRA6 1907 aa16.41■□□□□ 0.22
SS18L1-202ENST00000370848 EXTL3O43909 919 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 MICAL2O94851 1124 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 RPL9P32969 192 aaKnown RBP16.4■□□□□ 0.22
SS18L1-202ENST00000370848 NTHL1P78549 312 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 ROR1Q01973 937 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 PRKCQQ04759 706 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 TMEM132DQ14C87 1099 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 GPD1LQ8N335 351 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 ITFG1Q8TB96 612 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 SHDQ96IW2 340 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
SS18L1-202ENST00000370848 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
SS18L1-202ENST00000370848 GDE1Q9NZC3 331 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 CA14Q9ULX7 337 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 MAFFQ9ULX9 164 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.4■□□□□ 0.22
SS18L1-202ENST00000370848 OTOGLQ3ZCN5 2332 aa16.4■□□□□ 0.22
SS18L1-202ENST00000370848 CCL16O15467 120 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 ATF2P15336 505 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 LRPAP1P30533 357 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 CYP2J2P51589 502 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
SS18L1-202ENST00000370848 PABPC1LQ4VXU2 614 aaKnown RBP16.39■□□□□ 0.21
SS18L1-202ENST00000370848 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 LMBRD2Q68DH5 695 aaPredicted RBP16.39■□□□□ 0.21
SS18L1-202ENST00000370848 CD302Q8IX05 232 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 SMYD4Q8IYR2 804 aaPredicted RBP16.39■□□□□ 0.21
SS18L1-202ENST00000370848 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 SUSD3Q96L08 255 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 DNAH14Q0VDD8 3507 aa16.39■□□□□ 0.21
SS18L1-202ENST00000370848 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 ECI2O75521 394 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 GLULP15104 373 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 CYP3A5P20815 502 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 MCM4P33991 863 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 GPC5P78333 572 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 FOXK2Q01167 660 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 PFKPQ01813 784 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 PSMD2Q13200 908 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 VARS2Q5ST30 1063 aaKnown RBP16.38■□□□□ 0.21
SS18L1-202ENST00000370848 TPGS2Q68CL5 300 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 RDH13Q8NBN7 331 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms