RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LPPQ93052 612 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CYFIP2Q96F07 1278 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 MMS19Q96T76 1030 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CYP3A43Q9HB55 503 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CTIFO43310 598 aaKnown RBP17.92■□□□□ 0.46
PHGDH-202ENST00000369409 SRGAP2O75044 1071 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CYP1A1P04798 512 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CCL5P13501 91 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 MLH1P40692 756 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 NOMO3P69849 1222 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CENPCQ03188 943 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TUBB2AQ13885 445 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TRIM72Q6ZMU5 477 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 RHOT2Q8IXI1 618 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CPA5Q8WXQ8 436 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TSC1Q92574 1164 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TWNKQ96RR1 684 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TSPAN18Q96SJ8 248 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 TUBB2BQ9BVA1 445 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 RNF208Q9H0X6 261 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CHORDC1Q9UHD1 332 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-202ENST00000369409 SNX12Q9UMY4 172 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 COG5Q9UP83 839 aa17.92■□□□□ 0.46
PHGDH-202ENST00000369409 CILPO75339 1184 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 CD4P01730 458 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 IBSPP21815 317 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-202ENST00000369409 NSFP46459 744 aaKnown RBP17.91■□□□□ 0.46
PHGDH-202ENST00000369409 RAD23BP54727 409 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 DSC3Q14574 896 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 TRAF7Q6Q0C0 670 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 WHAMMQ8TF30 809 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 ZSWIM1Q9BR11 485 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 TLR10Q9BXR5 811 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHGDH-202ENST00000369409 GTF3C4Q9UKN8 822 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 PACSIN2Q9UNF0 486 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-202ENST00000369409 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-202ENST00000369409 TANC1Q9C0D5 1861 aa17.91■□□□□ 0.46
PHGDH-202ENST00000369409 CD19P15391 556 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 MBTPS1Q14703 1052 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 PTPROQ16827 1216 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 WHAMMP3Q1A5X7 153 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 SMYD5Q6GMV2 418 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 TFAP2BQ92481 460 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 ZNF560Q96MR9 790 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
PHGDH-202ENST00000369409 RPS6KC1Q96S38 1066 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 GAD1Q99259 594 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 PSMB7Q99436 277 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 ELOVL4Q9GZR5 314 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 SQORQ9Y6N5 450 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 PIRO00625 290 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 BUB1BO60566 1050 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-202ENST00000369409 ATF7P17544 494 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-202ENST00000369409 CYP3A5P20815 502 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 RAB27AP51159 221 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 DNA2P51530 1060 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 INCA1Q0VD86 236 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 MEI1Q5TIA1 1274 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 DAAM2Q86T65 1068 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 SLC4A11Q8NBS3 891 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 RNF169Q8NCN4 708 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 CAPZA3Q96KX2 299 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 ADAM2Q99965 735 aa17.9■□□□□ 0.46
PHGDH-202ENST00000369409 ZNF185O15231 689 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 CYP1A2P05177 515 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 PAEPP09466 180 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 NAA30Q147X3 362 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-202ENST00000369409 AGMOQ6ZNB7 445 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 MON1BQ7L1V2 547 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 FAM126BQ8IXS8 530 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 MCOLN2Q8IZK6 566 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 OSBPL9Q96SU4 736 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 CNOT8Q9UFF9 292 aaKnown RBP17.89■□□□□ 0.45
PHGDH-202ENST00000369409 OGDHLQ9ULD0 1010 aa17.89■□□□□ 0.45
PHGDH-202ENST00000369409 BARX2Q9UMQ3 279 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-202ENST00000369409 TADA3O75528 432 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 CDK7P50613 346 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 AFF1P51825 1210 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 NDST1P52848 882 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 HADHBP55084 474 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 C2CD6Q53TS8 623 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 MRPL10Q7Z7H8 261 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 SYCE1Q8N0S2 351 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 C1orf131Q8NDD1 294 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 GSTCDQ8NEC7 633 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 CAGE1Q8TC20 777 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TMEM176AQ96HP8 235 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 MRPL45Q9BRJ2 306 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 C11orf70Q9BRQ4 267 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 NUP85Q9BW27 656 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TRAIPQ9BWF2 469 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 GIT1Q9Y2X7 761 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 ARL5CA6NH57 179 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TCP1P17987 556 aaKnown RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 CXCR5P32302 372 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms