RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 LAMP2P13473 410 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 FSHRP23945 695 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 ADCY1Q08828 1119 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 GET4Q7L5D6 327 aaPredicted RBP20.46■□□□□ 0.87
CKS1B-203ENST00000368439 USP37Q86T82 979 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 C12orf56Q8IXR9 622 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 UBALD2Q8IYN6 164 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 NOC3LQ8WTT2 800 aaKnown RBP20.46■□□□□ 0.87
CKS1B-203ENST00000368439 CACTINQ8WUQ7 758 aaKnown RBP20.46■□□□□ 0.87
CKS1B-203ENST00000368439 TMEM209Q96SK2 561 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 CYP4F11Q9HBI6 524 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 KIAA1586Q9HCI6 787 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 POLIQ9UNA4 740 aa20.46■□□□□ 0.87
CKS1B-203ENST00000368439 KPNA7A9QM74 516 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 CYB561D2O14569 222 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 PRRG1O14668 218 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 ITGB3P05106 788 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 CPB1P15086 417 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 POLR2BP30876 1174 aaKnown RBP20.45■□□□□ 0.86
CKS1B-203ENST00000368439 ELF1P32519 619 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 PSMD2Q13200 908 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 GPR17Q13304 367 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 MYBPC2Q14324 1141 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 KNOP1Q1ED39 458 aaKnown RBP20.45■□□□□ 0.86
CKS1B-203ENST00000368439 KRBA2Q6ZNG9 492 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 OR5B17Q8NGF7 314 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 OR10T2Q8NGX3 314 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 ITFG1Q8TB96 612 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 CRISPLD1Q9H336 500 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 INTS13Q9NVM9 706 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 IGSF9Q9P2J2 1179 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 ITGA11Q9UKX5 1188 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 AGAP1Q9UPQ3 857 aa20.45■□□□□ 0.86
CKS1B-203ENST00000368439 KMT2EQ8IZD2 1858 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 ANHXE9PGG2 379 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 PNPLA4P41247 253 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 DPYDQ12882 1025 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 SNRNP35Q16560 246 aaKnown RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 SV2CQ496J9 727 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 PABPC1LQ4VXU2 614 aaKnown RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 LMBRD2Q68DH5 695 aaPredicted RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 POTEHQ6S545 545 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 LRRC52Q8N7C0 313 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 RSAD2Q8WXG1 361 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 ZNF560Q96MR9 790 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 MTMR12Q9C0I1 747 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 GZF1Q9H116 711 aaPredicted RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 AVENQ9NQS1 362 aaPredicted RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 EXOC1Q9NV70 894 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 CGNQ9P2M7 1197 aaKnown RBP20.44■□□□□ 0.86
CKS1B-203ENST00000368439 DSEQ9UL01 958 aa20.44■□□□□ 0.86
CKS1B-203ENST00000368439 ZNF202O95125 648 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 LRG1P02750 347 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 RPN1P04843 607 aaKnown RBP20.43■□□□□ 0.86
CKS1B-203ENST00000368439 CYP2J2P51589 502 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 TDGQ13569 410 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 SURF1Q15526 300 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 SLC5A9Q2M3M2 681 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 WSCD1Q658N2 575 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 HS2ST1Q7LGA3 356 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 CSGALNACT2Q8N6G5 542 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 XXYLT1Q8NBI6 393 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 RDH13Q8NBN7 331 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 FGF13Q92913 245 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 PGLYRP2Q96PD5 576 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 KCTD10Q9H3F6 313 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 CEP72Q9P209 647 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 CDH7Q9ULB5 785 aa20.43■□□□□ 0.86
CKS1B-203ENST00000368439 ZFP37Q9Y6Q3 630 aaPredicted RBP20.43■□□□□ 0.86
CKS1B-203ENST00000368439 MTMR11A4FU01 709 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 RHOBTB3O94955 611 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 RHOP08100 348 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 TMEM191BP0C7N4 346 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 PTPN2P17706 415 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 CYP24A1Q07973 514 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 HTR4Q13639 388 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 PSMD6Q15008 389 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 PRSS36Q5K4E3 855 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 CENPPQ6IPU0 288 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 WDR49Q8IV35 697 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 TMEM174Q8WUU8 243 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 PBXIP1Q96AQ6 731 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 ZCWPW1Q9H0M4 648 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 DMAC2Q9NW81 257 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 DUSP12Q9UNI6 340 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 YIPF1Q9Y548 306 aa20.42■□□□□ 0.86
CKS1B-203ENST00000368439 ZDBF2Q9HCK1 2354 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 NRG2O14511 850 aaPredicted RBP20.41■□□□□ 0.86
CKS1B-203ENST00000368439 RBP5P82980 135 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 TWF1Q12792 350 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 DUSP4Q13115 394 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 NPAS3Q8IXF0 933 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 FMR1NBQ8N0W7 255 aaPredicted RBP20.41■□□□□ 0.86
CKS1B-203ENST00000368439 SLC44A3Q8N4M1 653 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 ATAD1Q8NBU5 361 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 NXPE3Q969Y0 559 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 ANKRD36BP1Q96IX9 119 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 MFSD14AQ96MC6 490 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 GDAP2Q9NXN4 497 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms