RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CCSER1Q9C0I3 900 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.37
CKS1B-202ENST00000368436 DERAQ9Y315 318 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 OTOGLQ3ZCN5 2332 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 NUP210Q8TEM1 1887 aaPredicted RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 PIRO00625 290 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 MAN2B1O00754 1011 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 NMT1P30419 496 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 TEAD2Q15562 447 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 C9orf57Q5W0N0 161 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 MFSD6LQ8IWD5 586 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 ZBTB44Q8NCP5 570 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 ZSCAN18Q8TBC5 510 aaPredicted RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 LARP4BQ92615 738 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 RUBCNQ92622 972 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 ST6GALNAC4Q9H4F1 302 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
CKS1B-202ENST00000368436 PCDHGA2Q9Y5H1 932 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 STYXL1Q9Y6J8 313 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 TCHHQ07283 1943 aa17.38■□□□□ 0.37
CKS1B-202ENST00000368436 ANO9A1A5B4 782 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 SPTLC1O15269 473 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 GDI1P31150 447 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 DDIT3P35638 169 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 VIPR2P41587 438 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 EPHB3P54753 998 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 MAMSTRQ6ZN01 415 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 FAM212AQ96EL1 285 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 SENP8Q96LD8 212 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 ASB7Q9H672 318 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 PRMT8Q9NR22 394 aaPredicted RBP17.37■□□□□ 0.37
CKS1B-202ENST00000368436 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 ASB3Q9Y575 518 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 NCANO14594 1321 aa17.37■□□□□ 0.37
CKS1B-202ENST00000368436 F5P12259 2224 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 MTMR11A4FU01 709 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 HEPACAM2A8MVW5 462 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ARNTLO00327 626 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 LILRB5O75023 590 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 TBCAO75347 108 aaKnown RBP17.36■□□□□ 0.37
CKS1B-202ENST00000368436 CYP11A1P05108 521 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
CKS1B-202ENST00000368436 NFICP08651 508 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ODC1P11926 461 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ACOT2P49753 483 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 MLLT6P55198 1093 aaPredicted RBP17.36■□□□□ 0.37
CKS1B-202ENST00000368436 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
CKS1B-202ENST00000368436 TMEM132DQ14C87 1099 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
CKS1B-202ENST00000368436 SLFN12LQ6IEE8 588 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ATAD1Q8NBU5 361 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 TMEM209Q96SK2 561 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 ZSCAN32Q9NX65 697 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 SLC27A5Q9Y2P5 690 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 C2CD2Q9Y426 696 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
CKS1B-202ENST00000368436 A0A1W2PRU2 124 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 ZNF263O14978 683 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 MTAPQ13126 283 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 CUL4AQ13619 759 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 PTPAQ15257 358 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 ARMCX5Q6P1M9 558 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 USP49Q70CQ1 688 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 ZNF720Q7Z2F6 126 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 DNAJB7Q7Z6W7 309 aaPredicted RBP17.35■□□□□ 0.37
CKS1B-202ENST00000368436 KIAA2013Q8IYS2 634 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 OR10T2Q8NGX3 314 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 ATRIPQ8WXE1 791 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 FAM3CQ92520 227 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 PSMG2Q969U7 264 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 RSPRY1Q96DX4 576 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 MKNK1Q9BUB5 465 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 CHRDQ9H2X0 955 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 NDRG2Q9UN36 371 aaKnown RBP17.35■□□□□ 0.37
CKS1B-202ENST00000368436 PIAS3Q9Y6X2 628 aa17.35■□□□□ 0.37
CKS1B-202ENST00000368436 WDR87Q6ZQQ6 2873 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 TISP43B9A030 160 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 FCHO2Q0JRZ9 810 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 DENND4CQ5VZ89 1909 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 CRELD2Q6UXH1 353 aaPredicted RBP17.34■□□□□ 0.37
CKS1B-202ENST00000368436 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 TTC9BQ8N6N2 239 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
CKS1B-202ENST00000368436 HVCN1Q96D96 273 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 RMDN1Q96DB5 314 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 EPSTI1Q96J88 318 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 STRA6Q9BX79 667 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms