RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 MCEEQ96PE7 176 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 FHDC1Q9C0D6 1143 aaPredicted RBP19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 BTBD7Q9P203 1132 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 SCINQ9Y6U3 715 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 PHIPQ8WWQ0 1821 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 TCF7P36402 384 aaPredicted RBP19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 OSTNP61366 133 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 TXNRD3NBQ6F5E7 133 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CYP4F22Q6NT55 531 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CDR2LQ86X02 465 aaPredicted RBP19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 TRIM50Q86XT4 487 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 LRRC71Q8N4P6 559 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 DNERQ8NFT8 737 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 EXD1Q8NHP7 514 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 HAUS1Q96CS2 278 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 SERPINB12Q96P63 405 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CD2APQ9Y5K6 639 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CETPP11597 493 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 MMP8P22894 467 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 P3H1Q32P28 736 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 MFSD7Q6UXD7 560 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 NCAPG2Q86XI2 1143 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CCDC89Q8N998 374 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 DNPEPQ9ULA0 475 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 CNTN6Q9UQ52 1028 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 ARID2Q68CP9 1835 aa19.18■□□□□ 0.66
UBQLN4-201ENST00000368309 PCNTO95613 3336 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 IGKV6D-21A0A0A0MT36 114 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 ETS1P14921 441 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 SCTRP47872 440 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 TARBP2Q15633 366 aaKnown RBP19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 ICE2Q659A1 982 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 HOMER3Q9NSC5 361 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 PARP14Q460N5 1801 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 TFAMQ00059 246 aaKnown RBP19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 MPP2Q14168 576 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 DCUN1D2Q6PH85 259 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 PIGWQ7Z7B1 504 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 APOBEC3FQ8IUX4 373 aaKnown RBP19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 SAMD15Q9P1V8 674 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 ZNF148Q9UQR1 794 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 MNAT1P51948 309 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 OGDHQ02218 1023 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 CYP4A22Q5TCH4 519 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 VSTM1Q6UX27 236 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 ANKS4BQ8N8V4 417 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 GDAP1Q8TB36 358 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 TMEM134Q9H6X4 195 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 CISHQ9NSE2 258 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 GGT7Q9UJ14 662 aa19.17■□□□□ 0.66
UBQLN4-201ENST00000368309 SOWAHBA6NEL2 793 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 TMEM191CA6NGB0 347 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 GH1P01241 217 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 TMEM191BP0C7N4 346 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 ZNF252P-AS1Q0IIN9 211 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 RNF149Q8NC42 400 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 SLC40A1Q9NP59 571 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 RGPD3A6NKT7 1758 aaPredicted RBP19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 RGPD4Q7Z3J3 1758 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 CCT8L1PA6NM43 557 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 ASAP2O43150 1006 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 MSCO60682 206 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 KRT1P04264 644 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 GJB1P08034 283 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 CAV1Q03135 178 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 BRSK2Q8IWQ3 736 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 ZBTB10Q96DT7 871 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 HAUS2Q9NVX0 235 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 TCP11X1B4DZS4 312 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 RFC5P40937 340 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 PSMC4P43686 418 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 HIRAP54198 1017 aaPredicted RBP19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 GPAT2Q6NUI2 795 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 THNSL1Q8IYQ7 743 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 TMEM130Q8N3G9 435 aa19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 RBM15Q96T37 977 aaKnown RBP eCLIP19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 ACTR5Q9H9F9 607 aaPredicted RBP19.16■□□□□ 0.66
UBQLN4-201ENST00000368309 DOCK1Q14185 1865 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 BRAFP15056 766 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 ZNF132P52740 706 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 TFAP2BQ92481 460 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 NAALADL1Q9UQQ1 740 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 TOM1L1O75674 476 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 KLRC2P26717 231 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 DNAJC24Q6P3W2 148 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 SRRM1Q8IYB3 904 aaKnown RBP19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 SLITRK1Q96PX8 696 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 FGFR1OP2Q9NVK5 253 aa19.15■□□□□ 0.66
UBQLN4-201ENST00000368309 FAM189A1O60320 539 aa19.14■□□□□ 0.66
UBQLN4-201ENST00000368309 MAFO75444 373 aaPredicted RBP19.14■□□□□ 0.66
UBQLN4-201ENST00000368309 LBX2Q6XYB7 198 aa19.14■□□□□ 0.66
UBQLN4-201ENST00000368309 WDTC1Q8N5D0 677 aa19.14■□□□□ 0.66
UBQLN4-201ENST00000368309 SEPT1Q8WYJ6 367 aa19.14■□□□□ 0.66
UBQLN4-201ENST00000368309 LIASO43766 372 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 CETN2P41208 172 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms