RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.24
PTPRK-207ENST00000368226 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.24
PTPRK-207ENST00000368226 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 STKLD1Q8NE28 680 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 SPATA18Q8TC71 538 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 RBM15Q96T37 977 aaKnown RBP eCLIP13.52□□□□□ -0.241e-15■□□□□ 9.9
PTPRK-207ENST00000368226 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.52□□□□□ -0.24
PTPRK-207ENST00000368226 MYO1DO94832 1006 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 VCAM1P19320 739 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 DNAJB2P25686 324 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 MTIF3Q9H2K0 278 aaKnown RBP13.52□□□□□ -0.24
PTPRK-207ENST00000368226 TRABDQ9H4I3 376 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 EHD2Q9NZN4 543 aa13.52□□□□□ -0.24
PTPRK-207ENST00000368226 KIAA0391O15091 583 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 PHF2O75151 1096 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 RGS2P41220 211 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 ARHGEF7Q14155 803 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 SNX17Q15036 470 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 LY6KQ17RY6 165 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 SGO1Q5FBB7 561 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 ACOT1Q86TX2 421 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 MIB1Q86YT6 1006 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NUP93Q8N1F7 819 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NIF3L1Q9GZT8 377 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 RBM12Q9NTZ6 932 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 PTPRUQ92729 1446 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 EEF1DP29692 281 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 KDSRQ06136 332 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 GRB10Q13322 594 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NR1I3Q14994 352 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NUDT18Q6ZVK8 323 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 ACTR5Q9H9F9 607 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 MEGF6O75095 1541 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 GMNCA6NCL1 334 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NDUFS3O75489 264 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 LRG1P02750 347 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 PDHA1P08559 390 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 HMOX2P30519 316 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■□□□ 12
PTPRK-207ENST00000368226 BACE1P56817 501 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 E2F4Q16254 413 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 SPIRE2Q8WWL2 714 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 CEP19Q96LK0 163 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 ADARB2Q9NS39 739 aaKnown RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-207ENST00000368226 NEU2Q9Y3R4 380 aa13.52□□□□□ -0.25
PTPRK-207ENST00000368226 DLC1Q96QB1 1528 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 B3GAT3O94766 335 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
PTPRK-207ENST00000368226 TAF6P49848 677 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 NR1H3Q13133 447 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ARHGEF26Q96DR7 871 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 TASP1Q9H6P5 420 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SCOCQ9UIL1 159 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 DIP2CQ9Y2E4 1556 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SUPT3HB4E1H0 165 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 CST8O60676 142 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SUPT3HO75486 399 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SGPL1O95470 568 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 FAM200BP0CF97 657 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 IFNA8P32881 189 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 HNRNPH2P55795 449 aaKnown RBP13.51□□□□□ -0.25
PTPRK-207ENST00000368226 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 H0Y626 953 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 DDHD2O94830 711 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 HARS2P49590 506 aaKnown RBP13.51□□□□□ -0.25
PTPRK-207ENST00000368226 PIGHQ14442 188 aaPredicted RBP13.51□□□□□ -0.25
PTPRK-207ENST00000368226 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ING2Q9H160 280 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SPDYE7PQ495Y7 208 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 KCNT1Q5JUK3 1230 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 TAGAPQ8N103 731 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 PPP2R3CQ969Q6 453 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 KCND2Q9NZV8 630 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 AURKCQ9UQB9 309 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ATP11BQ9Y2G3 1177 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 SLC30A1Q9Y6M5 507 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 AK9Q5TCS8 1911 aa13.51□□□□□ -0.25
PTPRK-207ENST00000368226 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms