RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 CTNND2Q9UQB3 1225 aa8.9□□□□□ -0.98
MRPL55-211ENST00000366738 SDK1Q7Z5N4 2213 aa8.9□□□□□ -0.98
MRPL55-211ENST00000366738 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
MRPL55-211ENST00000366738 UBE4BO95155 1302 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PPP1R3GB7ZBB8 358 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 EIF3DO15371 548 aaKnown RBP eCLIP8.89□□□□□ -0.99
MRPL55-211ENST00000366738 ADAM12O43184 909 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 TBC1D4O60343 1298 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 KIF4AO95239 1232 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PRKCBP05771 671 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PRKCQQ04759 706 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PSMD2Q13200 908 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 STX1AQ16623 288 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 BMT2Q1RMZ1 405 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 KLHL10Q6JEL2 608 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PRSS55Q6UWB4 352 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-211ENST00000366738 TPRG1Q6ZUI0 275 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 GRASPQ7Z6J2 395 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-211ENST00000366738 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 ZBTB8OSQ8IWT0 167 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 HASPINQ8TF76 798 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 KCNN1Q92952 543 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
MRPL55-211ENST00000366738 BORCS6Q96GS4 357 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 MED15Q96RN5 788 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 TRIM6Q9C030 488 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-211ENST00000366738 DNAJC25Q9H1X3 360 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 C2orf40Q9H1Z8 148 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 ZDHHC7Q9NXF8 308 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 SNTG2Q9NY99 539 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 DPP7Q9UHL4 492 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 ADAM28Q9UKQ2 775 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 CDH7Q9ULB5 785 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 TBX20Q9UMR3 447 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 SSX2IPQ9Y2D8 614 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 AKAP13Q12802 2813 aa8.89□□□□□ -0.99
MRPL55-211ENST00000366738 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 CASTOR2A6NHX0 329 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ANKRD63C9JTQ0 380 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 TGFB1I1O43294 461 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 GDF9O60383 454 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ZMYND10O75800 440 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 TDGF1P13385 188 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 MAGEA9P43362 315 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 SMTNP53814 917 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 STX17P56962 302 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ZNF445P59923 1031 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 DMWDQ09019 674 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 GRIK3Q13003 919 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 MTAPQ13126 283 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 HSP90AA2PQ14568 343 aaPredicted RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ANO6Q4KMQ2 910 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ZBTB41Q5SVQ8 909 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 CD300LGQ6UXG3 332 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 PRR23BQ6ZRT6 265 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 GUF1Q8N442 669 aaKnown RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ZSWIM2Q8NEG5 633 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ITFG1Q8TB96 612 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 LNX1Q8TBB1 728 aaPredicted RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 HDAC7Q8WUI4 952 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 NELFBQ8WX92 580 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 FGF13Q92913 245 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 CLDN23Q96B33 292 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 HVCN1Q96D96 273 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 CLSTN3Q9BQT9 956 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 TARS2Q9BW92 718 aaKnown RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 COLEC11Q9BWP8 271 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 OSBPL6Q9BZF3 934 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 HAPLN2Q9GZV7 340 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 KCTD10Q9H3F6 313 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 PLEKHA4Q9H4M7 779 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 PRMT7Q9NVM4 692 aaPredicted RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 FNIP2Q9P278 1114 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 FLNBO75369 2602 aaKnown RBP8.88□□□□□ -0.99
MRPL55-211ENST00000366738 VWA8A3KMH1 1905 aa8.88□□□□□ -0.99
MRPL55-211ENST00000366738 RALGAPA1Q6GYQ0 2036 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 SHISA7A6NL88 538 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 H0YCG3 227 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 K7ERI5 159 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 ABLIM1O14639 778 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 HNRNPDLO14979 420 aaKnown RBP8.87□□□□□ -0.99
MRPL55-211ENST00000366738 CCL16O15467 120 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 MEFVO15553 781 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-211ENST00000366738 RECQL4O94761 1208 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 LETM1O95202 739 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-211ENST00000366738 PIGRP01833 764 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 CCDC192P0DO97 292 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 EFNA5P52803 228 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 NCBP1Q09161 790 aaKnown RBP8.87□□□□□ -0.99
MRPL55-211ENST00000366738 PAK1Q13153 545 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 TUSC3Q13454 348 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 FZD5Q13467 585 aa8.87□□□□□ -0.99
MRPL55-211ENST00000366738 PRPF4BQ13523 1007 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms