RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 MCL1Q07820 350 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 TRPC3Q13507 836 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 TFDP1Q14186 410 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 CCNG2Q16589 344 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 LACTB2Q53H82 288 aaPredicted RBP18.52■□□□□ 0.56
TRIM11-202ENST00000366699 PHLDB2Q86SQ0 1253 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 ZBTB33Q86T24 672 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 KATNAL2Q8IYT4 538 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 BBOF1Q8ND07 529 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 CCDC114Q96M63 670 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 SCLT1Q96NL6 688 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 GPR20Q99678 358 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 ASCC2Q9H1I8 757 aaPredicted RBP18.52■□□□□ 0.56
TRIM11-202ENST00000366699 KDM4CQ9H3R0 1056 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 IP6K2Q9UHH9 426 aa18.52■□□□□ 0.56
TRIM11-202ENST00000366699 UMODL1Q5DID0 1318 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 PEX10O60683 326 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ACSL3O95573 720 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 TTC4O95801 387 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 EDN1P05305 212 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 SRGAP2CP0DJJ0 459 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ADCY8P40145 1251 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ITGA8P53708 1063 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 KLF1Q13351 362 aaPredicted RBP18.52■□□□□ 0.55
TRIM11-202ENST00000366699 KCTD2Q14681 263 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ANKRD20A8PQ5CZ79 823 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 CELF3Q5SZQ8 465 aaKnown RBP18.52■□□□□ 0.55
TRIM11-202ENST00000366699 RNF149Q8NC42 400 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 FEZF2Q8TBJ5 459 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ZNF606Q8WXB4 792 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 OTUD5Q96G74 571 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 PRMT1Q99873 361 aaKnown RBP18.52■□□□□ 0.55
TRIM11-202ENST00000366699 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ELP3Q9H9T3 547 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 ANAPC5Q9UJX4 755 aa18.52■□□□□ 0.55
TRIM11-202ENST00000366699 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 LCTP09848 1927 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 RALAP11233 206 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 NF2P35240 595 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 ZNF132P52740 706 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 SEZ6Q53EL9 994 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 C2CD6Q53TS8 623 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 EXOC3L1Q86VI1 746 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 TAX1BP1Q86VP1 789 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 ANKRD13AQ8IZ07 590 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 EXD1Q8NHP7 514 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 HERPUD2Q9BSE4 406 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 ZNF518BQ9C0D4 1074 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 NIF3L1Q9GZT8 377 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 AGTPBP1Q9UPW5 1226 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 MARK3P27448 753 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 YWHAEP62258 255 aaKnown RBP18.51■□□□□ 0.55
TRIM11-202ENST00000366699 CNGA2Q16280 664 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 LONRF1Q17RB8 773 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 PIGWQ7Z7B1 504 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 CCDC89Q8N998 374 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 CCT6BQ92526 530 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 NSRP1Q9H0G5 558 aaKnown RBP18.51■□□□□ 0.55
TRIM11-202ENST00000366699 SAMD15Q9P1V8 674 aa18.51■□□□□ 0.55
TRIM11-202ENST00000366699 IGKV6-21A0A0C4DH24 114 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 FAM189A1O60320 539 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 GHRP10912 638 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 MMP8P22894 467 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 CHKAP35790 457 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 SSR1P43307 286 aaKnown RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 MKRN4PQ13434 485 aaPredicted RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 ITIH4Q14624 930 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 LLGL2Q6P1M3 1020 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 ZNF365Q70YC5 407 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 TMEM35BQ8NCS4 154 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 FAM212AQ96EL1 285 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 OSBPL8Q9BZF1 889 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 MTMR12Q9C0I1 747 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 CPSF3Q9UKF6 684 aaKnown RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 CEP83Q9Y592 693 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 A0A0G2JMZ2 1700 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 DNM1LO00429 736 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 TNFSF9P41273 254 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 TAP1Q03518 808 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 TRIP13Q15645 432 aaPredicted RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 UBR7Q8N806 425 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 ARHGEF2Q92974 986 aaKnown RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 HEMGNQ9BXL5 484 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 SMARCAD1Q9H4L7 1026 aa18.5■□□□□ 0.55
TRIM11-202ENST00000366699 R3HDM2Q9Y2K5 976 aaKnown RBP18.5■□□□□ 0.55
TRIM11-202ENST00000366699 LOC102724159A0A0B4J2E5 919 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 ADM5C9JUS6 153 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 TCEA3O75764 348 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 CNMDO75829 334 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
TRIM11-202ENST00000366699 TNNC2P02585 160 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 CFHP08603 1231 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 TMEM191BP0C7N4 346 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 OSBPP22059 807 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 LMNB2Q03252 620 aa18.49■□□□□ 0.55
TRIM11-202ENST00000366699 PWP2Q15269 919 aaKnown RBP18.49■□□□□ 0.55
TRIM11-202ENST00000366699 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms