RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 GPR160Q9UJ42 338 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AJAP1Q9UKB5 411 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CA14Q9ULX7 337 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GPR34Q9UPC5 381 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A0A0G2JNJ9 132 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A0A1W2PPH5 198 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FAM170AA1A519 330 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PGPEP1LA6NFU8 196 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HMX3A6NHT5 357 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 H0Y858 1186 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MYO1CO00159 1063 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 N4BP3O15049 544 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ANP32CO43423 234 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 USO1O60763 962 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TIPRLO75663 272 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RASSF9O75901 435 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ACTL6BO94805 426 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMEM63AO94886 807 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL18BPO95998 194 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HPXP02790 462 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GNAI2P04899 355 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MPOP05164 745 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CD1AP06126 327 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZSCAN22P10073 491 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RARBP10826 455 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MTHFD1P11586 935 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NCAM1P13591 858 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BTF3P20290 206 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MAPKAPK2P49137 400 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CASP6P55212 293 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ERVFRD-1P60508 538 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NOMO3P69849 1222 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PRR5P85299 388 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMEM62Q0P6H9 643 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLC12A1Q13621 1099 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LRP8Q14114 963 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MEA1Q16626 185 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ARHGAP15Q53QZ3 475 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FAM26FQ5R3K3 315 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ARMC3Q5W041 872 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMC5Q6UXY8 1006 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KIAA0408Q6ZU52 694 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BBS12Q6ZW61 710 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PLXDC1Q8IUK5 500 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BCL6BQ8N143 479 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MPP5Q8N3R9 675 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DNAJC5GQ8N7S2 189 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NKAIN3Q8N8D7 197 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DCBLD1Q8N8Z6 715 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL17RDQ8NFM7 739 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CFHR4Q92496 578 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DDX17Q92841 729 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RILPL2Q969X0 211 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SPSB4Q96A44 273 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 COG8Q96MW5 612 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RBM15Q96T37 977 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TACO1Q9BSH4 297 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RTKNQ9BST9 563 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AP1M1Q9BXS5 423 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PAIP1Q9H074 479 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 C11orf54Q9H0W9 315 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PABPC3Q9H361 631 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SEMA6BQ9H3T3 888 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LDAHQ9H6V9 325 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MLXIPQ9HAP2 919 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NOD2Q9HC29 1040 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLAMF7Q9NQ25 335 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HEYLQ9NQ87 328 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PRDM8Q9NQV8 689 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TLR9Q9NR96 1032 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KCND1Q9NSA2 647 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MOCS1Q9NZB8 636 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ORC3Q9UBD5 711 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RBPJLQ9UBG7 517 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 Q9UFV3 132 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MAGEL2Q9UJ55 1249 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MID2Q9UJV3 735 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CAPN11Q9UMQ6 739 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MTO1Q9Y2Z2 717 aaKnown RBP4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 VWA7Q9Y334 891 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PLEKHM1Q9Y4G2 1056 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HS3ST4Q9Y661 456 aa4.23□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A0A087WWL8 130 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FCHO1O14526 889 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RTN3O95197 1032 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 EFEMP2O95967 443 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TK1P04183 234 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PRKCBP05771 671 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GYPEP15421 78 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PCSK1P29120 753 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PTPN7P35236 360 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KRT20P35900 424 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DRG2P55039 364 aaKnown RBP4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SP140Q13342 867 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CUL4BQ13620 913 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KRT32Q14532 448 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLC29A2Q14542 456 aa4.22□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SURF1Q15526 300 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms