RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 P4HA1P13674 534 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 RPL9P32969 192 aaKnown RBP22.12■■□□□ 1.13
SHISA4-201ENST00000362011 STAT1P42224 750 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 WDR5P61964 334 aaKnown RBP22.12■■□□□ 1.13
SHISA4-201ENST00000362011 CUL2Q13617 745 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 SV2CQ496J9 727 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 SFMBT2Q5VUG0 894 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 FMNL3Q8IVF7 1028 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 UROC1Q96N76 676 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 ZNHIT6Q9NWK9 470 aaKnown RBP22.12■■□□□ 1.13
SHISA4-201ENST00000362011 F8VZ95 297 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 NRDCO43847 1150 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 UPP2O95045 317 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 KCNJ6P48051 423 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 TAF6P49848 677 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 TNNC1P63316 161 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 RNASELQ05823 741 aaKnown RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 SYN2Q92777 582 aaPredicted RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 JAKMIP2Q96AA8 810 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 TRIM44Q96DX7 344 aaPredicted RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 DDX27Q96GQ7 796 aaKnown RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 CASD1Q96PB1 797 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 FAM193BQ96PV7 902 aaPredicted RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 MRPL9Q9BYD2 267 aaKnown RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 TBC1D13Q9NVG8 400 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 NXF1Q9UBU9 619 aaKnown RBP22.11■■□□□ 1.13
SHISA4-201ENST00000362011 POLIQ9UNA4 740 aa22.11■■□□□ 1.13
SHISA4-201ENST00000362011 TRANK1O15050 2925 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 NCOR1O75376 2440 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 CASTOR2A6NHX0 329 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 PODXLO00592 558 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 SOX5P35711 763 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 GATMP50440 423 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 YWHAEP62258 255 aaKnown RBP22.1■■□□□ 1.13
SHISA4-201ENST00000362011 ASIC2Q16515 512 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 WDR72Q3MJ13 1102 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 SCARA5Q6ZMJ2 495 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 CCDC112Q8NEF3 446 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 PHOSPHO2Q8TCD6 241 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 SHC3Q92529 594 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 GPR88Q9GZN0 384 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 MYH10P35580 1976 aa22.1■■□□□ 1.13
SHISA4-201ENST00000362011 TBKBP1A7MCY6 615 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 ZBBXA8MT70 800 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 FERP16591 822 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 HNRNPH3P31942 346 aaKnown RBP22.09■■□□□ 1.13
SHISA4-201ENST00000362011 CLCNKBP51801 687 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 DEFB103AP81534 67 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 TOP1MTQ969P6 601 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 SLC9A7Q96T83 725 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 ARID3AQ99856 593 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 BCO2Q9BYV7 579 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 AIPL1Q9NZN9 384 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 CACNG4Q9UBN1 327 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 MTCH2Q9Y6C9 303 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 VWA8A3KMH1 1905 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 BDP1A6H8Y1 2624 aa22.09■■□□□ 1.13
SHISA4-201ENST00000362011 GFPT2O94808 682 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 DDHD2O94830 711 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 CA3P07451 260 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 FECHP22830 423 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 ASPAP45381 313 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 DSC1Q08554 894 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 MEA1Q16626 185 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 UPP1Q16831 310 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 E4F1Q66K89 784 aaPredicted RBP22.08■■□□□ 1.13
SHISA4-201ENST00000362011 BAG1Q99933 345 aaPredicted RBP22.08■■□□□ 1.13
SHISA4-201ENST00000362011 CYP3A43Q9HB55 503 aa22.08■■□□□ 1.13
SHISA4-201ENST00000362011 KPNA7A9QM74 516 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 FOXN3O00409 490 aaPredicted RBP22.07■■□□□ 1.12
SHISA4-201ENST00000362011 DGKIO75912 1065 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 CCDC172P0C7W6 258 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 PNMA6AP0CW24 399 aaPredicted RBP22.07■■□□□ 1.12
SHISA4-201ENST00000362011 PAX3P23760 479 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 SMYD5Q6GMV2 418 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 ZNF280BQ86YH2 543 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 COLGALT2Q8IYK4 626 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 LRRC43Q8N309 656 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 MMS19Q96T76 1030 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 GDAP2Q9NXN4 497 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 PCDHB4Q9Y5E5 795 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 SNX9Q9Y5X1 595 aa22.07■■□□□ 1.12
SHISA4-201ENST00000362011 KRT5P13647 590 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 USP8P40818 1118 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 LILRA4P59901 499 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 CCZ1BP86790 482 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 CCZ1P86791 482 aaPredicted RBP22.06■■□□□ 1.12
SHISA4-201ENST00000362011 ARID5AQ03989 594 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 PAN2Q504Q3 1202 aaKnown RBP22.06■■□□□ 1.12
SHISA4-201ENST00000362011 HS1BP3Q53T59 392 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 WDR59Q6PJI9 974 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 CYP26C1Q6V0L0 522 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 GPIHBP1Q8IV16 184 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TMEM139Q8IV31 216 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 FAM71AQ8IYT1 594 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 UBR7Q8N806 425 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 ZNF830Q96NB3 372 aaPredicted RBP22.06■■□□□ 1.12
SHISA4-201ENST00000362011 PAAF1Q9BRP4 392 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 KCNF1Q9H3M0 494 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 FAM124BQ9H5Z6 455 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms