RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MTMR12Q9C0I1 747 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 ASB7Q9H672 318 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 PIN4Q9Y237 131 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 MYH10P35580 1976 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 HEXIM1O94992 359 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 GRM5P41594 1212 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 MAGEA9P43362 315 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 TRPC3Q13507 836 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 UBXN11Q5T124 520 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 TATDN2Q93075 761 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 AGO3Q9H9G7 860 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 EPB41L5Q9HCM4 733 aa14.06□□□□□ -0.16
SQSTM1-201ENST00000360718 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 EVI5O60447 810 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 FTCDO95954 541 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 NFICP08651 508 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 GUCY2DQ02846 1103 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 PTK7Q13308 1070 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 NCOA4Q13772 614 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 SPOPLQ6IQ16 392 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 CD302Q8IX05 232 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 MREGQ8N565 214 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 EIF1ADQ8N9N8 165 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 KREMEN1Q96MU8 473 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 NXF3Q9H4D5 531 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 SNTG2Q9NY99 539 aa14.05□□□□□ -0.16
SQSTM1-201ENST00000360718 FOXN3O00409 490 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 DNM1LO00429 736 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 USP8P40818 1118 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 YARSP54577 528 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 CORO7P57737 925 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 SKOR1P84550 965 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 GCNT1Q02742 428 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 HELQQ8TDG4 1101 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 ST3GAL5Q9UNP4 418 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 EBAG9O00559 213 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 TRIM66O15016 1216 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 GLI1P08151 1106 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 LBX1P52954 281 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 MRPS25P82663 173 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 PTK2Q05397 1052 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 JADE1Q6IE81 842 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 TRAF7Q6Q0C0 670 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 USP38Q8NB14 1042 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 IFT81Q8WYA0 676 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 KRT12Q99456 494 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 APOBEC3GQ9HC16 384 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 NFU1Q9UMS0 254 aa14.04□□□□□ -0.16
SQSTM1-201ENST00000360718 ARVCFO00192 962 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 TBXAS1P24557 533 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 GNGT1P63211 74 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 NT5DC4Q86YG4 428 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 PPM1EQ8WY54 764 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 PLEKHA5Q9HAU0 1116 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 UMODL1Q5DID0 1318 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 EIF3HO15372 352 aaKnown RBP eCLIP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 GHRP10912 638 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 AKAP5P24588 427 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 NOP2P46087 812 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 CARSP49589 748 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 CDK7P50613 346 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 TMEM132DQ14C87 1099 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 FBXO47Q5MNV8 452 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 TWF2Q6IBS0 349 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 CTU1Q7Z7A3 348 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 IQCKQ8N0W5 287 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 C1orf131Q8NDD1 294 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 SHC3Q92529 594 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 ZIM3Q96PE6 472 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 SEZ6LQ9BYH1 1024 aa14.03□□□□□ -0.16
SQSTM1-201ENST00000360718 GPR182O15218 404 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 CKBP12277 381 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 CD52P31358 61 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 DNA2P51530 1060 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 GUCY2FP51841 1108 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 NOP14P78316 857 aaKnown RBP14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 LPIN1Q14693 890 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 MBTPS1Q14703 1052 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 ALKBH5Q6P6C2 394 aaKnown RBP14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 ZNF571Q7Z3V5 609 aaPredicted RBP14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 FAM71AQ8IYT1 594 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 SMG8Q8ND04 991 aaKnown RBP14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 CXorf38Q8TB03 319 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 ZNF333Q96JL9 665 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 ZMAT2Q96NC0 199 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms