RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MAP2K7O14733 419 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 THAP12O43422 761 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 CA12O43570 354 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 RTN2O75298 545 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 AKAP5P24588 427 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 ANXA13P27216 316 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 SREBF2Q12772 1141 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 NUP85Q9BW27 656 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 AP5M1Q9H0R1 490 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 NXF3Q9H4D5 531 aaKnown RBP13.48□□□□□ -0.25
GGPS1-202ENST00000358966 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 SNTG2Q9NY99 539 aa13.48□□□□□ -0.25
GGPS1-202ENST00000358966 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 PPEF2O14830 753 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ASPAP45381 313 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 RWDD2BP57060 319 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 LACTBP83111 547 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ARMC2Q8NEN0 867 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ALG3Q92685 438 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 WNT8BQ93098 351 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 NFKBIZQ9BYH8 718 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 OSBPL7Q9BZF2 842 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 CISHQ9NSE2 258 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 NRCAMQ92823 1304 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ESYT3A0FGR9 886 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 SKAP2O75563 359 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 CTSHP09668 335 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 RRM1P23921 792 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 GPC5P78333 572 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 DPH6Q7L8W6 267 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 SOCS4Q8WXH5 440 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
GGPS1-202ENST00000358966 SDCBP2Q9H190 292 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 ABCB6Q9NP58 842 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 PCDHB2Q9Y5E7 798 aa13.47□□□□□ -0.25
GGPS1-202ENST00000358966 A0A1B0GUA9 196 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 ITGA4P13612 1032 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 CCND3P30281 292 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-202ENST00000358966 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.25
GGPS1-202ENST00000358966 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 ZNF564Q8TBZ8 553 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-202ENST00000358966 TFAP2BQ92481 460 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 CNOT8Q9UFF9 292 aaKnown RBP13.46□□□□□ -0.25
GGPS1-202ENST00000358966 INTUQ9ULD6 942 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 ALG6Q9Y672 507 aa13.46□□□□□ -0.25
GGPS1-202ENST00000358966 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-202ENST00000358966 B4GALT4O60513 344 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 TNNC2P02585 160 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-202ENST00000358966 TM4SF4P48230 202 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 CPT1AP50416 773 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 SNX1Q13596 522 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 TRADDQ15628 312 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 FAM187BQ17R55 369 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 TAF4BQ92750 862 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 C18orf25Q96B23 403 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-202ENST00000358966 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 RNF39Q9H2S5 420 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 RNF186Q9NXI6 227 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 CACNG4Q9UBN1 327 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.26
GGPS1-202ENST00000358966 PIN4Q9Y237 131 aaKnown RBP13.46□□□□□ -0.26
GGPS1-202ENST00000358966 O00370 1275 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 AKR1A1P14550 325 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 ADAM17P78536 824 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 ENOSF1Q7L5Y1 443 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 TRIM73Q86UV7 250 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 ZNF606Q8WXB4 792 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 KRT12Q99456 494 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 KIF9Q9HAQ2 790 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 MBLAC1A4D2B0 266 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-202ENST00000358966 IGHA2P01877 340 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 MCF2P10911 925 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 CYBAP13498 195 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 PRLRP16471 622 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 COMTP21964 271 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms