RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 VCLP18206 1134 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 ARSEP51690 589 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 MAGOHP61326 146 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 LRRC14Q15048 493 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 IER5Q5VY09 327 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 BHMTQ93088 406 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 MTERF3Q96E29 417 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 OSBPL1AQ9BXW6 950 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 TASP1Q9H6P5 420 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 BLOC1S6Q9UL45 172 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 V9GYQ6 96 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 C3P01024 1663 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 A0A0G2JLW4 131 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 DYNC1LI2O43237 492 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-202ENST00000358808 RPS6KA5O75582 802 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-202ENST00000358808 NFICP08651 508 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 ENO3P13929 434 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-202ENST00000358808 CHRNA5P30532 468 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 GPC1P35052 558 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 PRIM2P49643 509 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 ANXA11P50995 505 aaKnown RBP10.65□□□□□ -0.71
CLIP1-202ENST00000358808 RAB14P61106 215 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 FBXW10Q5XX13 1052 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 P3H2Q8IVL5 708 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 PHACTR4Q8IZ21 702 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 MMGT1Q8N4V1 131 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 MARCH10Q8NA82 808 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-202ENST00000358808 TNIP2Q8NFZ5 429 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 DPF3Q92784 378 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 AGAP1Q9UPQ3 857 aa10.65□□□□□ -0.71
CLIP1-202ENST00000358808 EVPLLA8MZ36 301 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CLK1P49759 484 aaKnown RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CDH18Q13634 790 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 NCAPHQ15003 741 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 ST13P5Q8NFI4 369 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 NFIBO00712 420 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 PLEKHA8P1O95397 391 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 FTLP02792 175 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CUL4AQ13619 759 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CNGA3Q16281 694 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 TRIM72Q6ZMU5 477 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 UCMAQ8WVF2 138 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 C1orf54Q8WWF1 131 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CCDC3Q9BQI4 270 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 WWP1Q9H0M0 922 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 ABCB6Q9NP58 842 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 SNX9Q9Y5X1 595 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 E2F8A0AVK6 867 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CYP2D6P10635 497 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 TNNI3P19429 210 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 PLA2G4AP47712 749 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CASP8Q14790 479 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 USP17L6PQ6QN14 398 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 SP8Q8IXZ3 490 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MED15Q96RN5 788 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CINPQ9BW66 212 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 STAP2Q9UGK3 403 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CYP2B6P20813 491 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 KCNK10P57789 538 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 KDSRQ06136 332 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 TMEM62Q0P6H9 643 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 COASYQ13057 564 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 KCNB1Q14721 858 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 TMEM132DQ14C87 1099 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 KCNV1Q6PIU1 500 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CCDC81Q6ZN84 652 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 SLC44A2Q8IWA5 706 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 NBPF15Q8N660 670 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 POMGNT2Q8NAT1 580 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 NSUN7Q8NE18 718 aaKnown RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 GINS4Q9BRT9 223 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 LXNQ9BS40 222 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 KLHL31Q9H511 634 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 IL1RL2Q9HB29 575 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CDYLQ9Y232 598 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MROH7-TTC4A0A0A0MT08 1334 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MST1RQ04912 1400 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MED14O60244 1454 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms