RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 FZD1Q9UP38 647 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 STAM2O75886 525 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 UBOX5O94941 541 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 PIGRP01833 764 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 EDN1P05305 212 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 ATP4AP20648 1035 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 KLRC2P26717 231 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 ZNF280AP59817 542 aaPredicted RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 STAT4Q14765 748 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 DCAF15Q66K64 600 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 MCEEQ96PE7 176 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 DHX33Q9H6R0 707 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 NKIRAS1Q9NYS0 192 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 DNPEPQ9ULA0 475 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 NAALADL1Q9UQQ1 740 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 A0A0B4J269 797 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 LIASO43766 372 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 PTPRAP18433 802 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MMP8P22894 467 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MAGEA4P43358 317 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 LMNB2Q03252 620 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 PPP1R2P3Q6NXS1 205 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ARHGEF18Q6ZSZ5 1173 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 SPATA21Q7Z572 469 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 FAM228AQ86W67 206 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CEP57Q86XR8 500 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MICALL2Q8IY33 904 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 GLIS1Q8NBF1 620 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 SLITRK1Q96PX8 696 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 SAYSD1Q9NPB0 183 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ZNF148Q9UQR1 794 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CNTNAP2Q9UHC6 1331 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 EXOC1LA0A1B0GW35 172 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 RASA4BC9J798 803 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 RASA4O43374 803 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 DNAJC24Q6P3W2 148 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MFSD7Q6UXD7 560 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CEP128Q6ZU80 1094 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 TBC1D1Q86TI0 1168 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 RELL1Q8IUW5 271 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CCHCR1Q8TD31 782 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 TCP11Q8WWU5 503 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ZNF606Q8WXB4 792 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ACSF2Q96CM8 615 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 HAUS1Q96CS2 278 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 AGAP1Q9UPQ3 857 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CNTN6Q9UQ52 1028 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 MGRN1O60291 552 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 TJP3O95049 919 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ZSCAN5DPP0CG00 497 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 ARL2P36404 184 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ARSEP51690 589 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ZNF252P-AS1Q0IIN9 211 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ZNF394Q53GI3 561 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 DCUN1D2Q6PH85 259 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 PPP1R21Q6ZMI0 780 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
RFX3-202ENST00000358730 RCOR2Q8IZ40 523 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 CFAP57Q96MR6 1250 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 IVNS1ABPQ9Y6Y0 642 aa9.09□□□□□ -0.95
RFX3-202ENST00000358730 ADGRA2Q96PE1 1338 aa9.09□□□□□ -0.96
RFX3-202ENST00000358730 CFAP73A6NFT4 308 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 TMEM191CA6NGB0 347 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 DNALI1O14645 258 aaPredicted RBP9.08□□□□□ -0.96
RFX3-202ENST00000358730 ATP6V1G2O95670 118 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 CALB1P05937 261 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 ABHD2P08910 425 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 TMEM191BP0C7N4 346 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 IBSPP21815 317 aaPredicted RBP9.08□□□□□ -0.96
RFX3-202ENST00000358730 TNFSF9P41273 254 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 ZNF132P52740 706 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 TGFB2P61812 414 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 GPS1Q13098 491 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 CAPSQ13938 189 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 STXBP2Q15833 593 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 HP1BP3Q5SSJ5 553 aaPredicted RBP9.08□□□□□ -0.96
RFX3-202ENST00000358730 TMEM63BQ5T3F8 832 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 RIBC1Q8N443 379 aaPredicted RBP9.08□□□□□ -0.96
RFX3-202ENST00000358730 MAGEB18Q96M61 343 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 CAMKK2Q96RR4 588 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 PAIP2Q9BPZ3 127 aaKnown RBP9.08□□□□□ -0.96
RFX3-202ENST00000358730 FOXP3Q9BZS1 431 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 ECT2Q9H8V3 914 aa9.08□□□□□ -0.96
RFX3-202ENST00000358730 EURLQ9NYK6 297 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms