RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 MPP6Q9NZW5 540 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 POU1F1P28069 291 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 C11orf88Q6PI97 169 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 ARHGEF26Q96DR7 871 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TSPAN17Q96FV3 270 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 ZNF518AQ6AHZ1 1483 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SKAP2O75563 359 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 CHRM3P20309 590 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 CCDC157Q569K6 752 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 INTS13Q9NVM9 706 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PIN4Q9Y237 131 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 HNRNPRO43390 633 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 UPP2O95045 317 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 KLHL2O95198 593 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 LSP1P33241 339 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 OTUD4Q01804 1114 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 DUOXA2Q1HG44 320 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 FLAD1Q8NFF5 587 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 BPIFA3Q9BQP9 254 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 FEM1BQ9UK73 627 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SNAP23O00161 211 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 C21orf2O43822 256 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 COX10Q12887 443 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PLEKHA7Q6IQ23 1121 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 FAM167AQ96KS9 214 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TMEM191CA6NGB0 347 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 ZNF23P17027 643 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 KYNUQ16719 465 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 XPO6Q96QU8 1125 aaKnown RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SEPT5Q99719 369 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SLC39A10Q9ULF5 831 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PIPSLA2A3N6 862 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 F8W810 466 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TAP1Q03518 808 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 VEPH1Q14D04 833 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TSC22D1Q15714 1073 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-202ENST00000358392 AHI1Q8N157 1196 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TADA1Q96BN2 335 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PNKPQ96T60 521 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 SLC30A1Q9Y6M5 507 aa11.68□□□□□ -0.54
COL11A1-202ENST00000358392 PDZK1P1A8MUH7 402 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 RAD51CO43502 376 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 ARHGEF7Q14155 803 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 CYP4A22Q5TCH4 519 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 KRT78Q8N1N4 520 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 UBA3Q8TBC4 463 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 MTO1Q9Y2Z2 717 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 CENPLQ8N0S6 344 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 RNF149Q8NC42 400 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 MAGEB10Q96LZ2 347 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 ATP6V1HQ9UI12 483 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 CYBBP04839 570 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 YWHABP31946 246 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 ATP1A4Q13733 1029 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 MAGED4Q96JG8 741 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 ROGDIQ9GZN7 287 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 HAO1Q9UJM8 370 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 DNALI1O14645 258 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 GSTM1P09488 218 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 BYSLQ13895 437 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 WDR72Q3MJ13 1102 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 UTP6Q9NYH9 597 aaKnown RBP11.67□□□□□ -0.54
COL11A1-202ENST00000358392 FAM153AQ9UHL3 310 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 AGAP1Q9UPQ3 857 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 EVPLLA8MZ36 301 aa11.67□□□□□ -0.54
COL11A1-202ENST00000358392 RHOBTB1O94844 696 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms