RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ALOX15BO15296 676 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 MAFGO15525 162 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 ZBED4O75132 1171 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 DGAT1O75907 488 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 ACO1P21399 889 aaKnown RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 PLA2G4FQ68DD2 849 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 RSBN1LQ6PCB5 846 aaPredicted RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 ERICH1Q86X53 443 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 FEZF2Q8TBJ5 459 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 LRRC8CQ8TDW0 803 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 ZNF570Q96NI8 536 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 MYLK2Q9H1R3 596 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 PCDHA10Q9Y5I2 948 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 PLSCR1O15162 318 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ZWINTO95229 277 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 CCNE2O96020 404 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ANKRD20A2Q5SQ80 823 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ANKRD20A1Q5TYW2 823 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ANKRD20A3Q5VUR7 823 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 CYP4F22Q6NT55 531 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 PCGF5Q86SE9 256 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 TEX9Q8N6V9 391 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ERP27Q96DN0 273 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 PWWP2AQ96N64 755 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 FNBP1Q96RU3 617 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
RTN4-204ENST00000357732 ARID2Q68CP9 1835 aa18.72■□□□□ 0.59
RTN4-204ENST00000357732 TLR3O15455 904 aaKnown RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 C4BPAP04003 597 aaKnown RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 CUL2Q13617 745 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 WASHC2DQ5SRD0 308 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 CENPUQ71F23 418 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 FAM213AQ9BRX8 229 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 FRMD8P1Q9BZ68 369 aaPredicted RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 RNPEPL1Q9HAU8 725 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 ARHGAP28Q9P2N2 729 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 PSMC3IPQ9P2W1 217 aaPredicted RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 STYXL1Q9Y6J8 313 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 HLA-DRAP01903 254 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 RNASELQ05823 741 aaKnown RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 SLC45A4Q5BKX6 768 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 FAM83AQ86UY5 434 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 BSNDQ8WZ55 320 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 ZNF516Q92618 1163 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 NKD2Q969F2 451 aaPredicted RBP18.71■□□□□ 0.59
RTN4-204ENST00000357732 SLITRK1Q96PX8 696 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 C11orf70Q9BRQ4 267 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 KIFC3Q9BVG8 833 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 PDLIM7Q9NR12 457 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 SAR1AQ9NR31 198 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
RTN4-204ENST00000357732 FOXO6A8MYZ6 492 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 ITGAVP06756 1048 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 KRT15P19012 456 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 GNA15P30679 374 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 DSG3P32926 999 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 PIK3CAP42336 1068 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 MAP3K10Q02779 954 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 TAP1Q03518 808 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 FAM47EQ6ZV65 393 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 UTP4Q969X6 686 aaKnown RBP18.7■□□□□ 0.58
RTN4-204ENST00000357732 GPRASP2Q96D09 838 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 PDCD2LQ9BRP1 358 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 SLC38A10Q9HBR0 1119 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 PCDH9Q9HC56 1237 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 DDX56Q9NY93 547 aaKnown RBP18.7■□□□□ 0.58
RTN4-204ENST00000357732 A8MUI8 341 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 SMAPO00193 183 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 TYROBPO43914 113 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 CALB2P22676 271 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 ENDOVQ8N8Q3 282 aaKnown RBP18.7■□□□□ 0.58
RTN4-204ENST00000357732 BICD1Q96G01 975 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 FAXDC2Q96IV6 333 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 HOMER2Q9NSB8 354 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 LNPEPQ9UIQ6 1025 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 TRIM33Q9UPN9 1127 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 ZNF148Q9UQR1 794 aa18.7■□□□□ 0.58
RTN4-204ENST00000357732 C2CD2LO14523 706 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 LMNAP02545 664 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 PECAM1P16284 738 aaPredicted RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 CD58P19256 250 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 PHBP35232 272 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 ARSEP51690 589 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 VCPP55072 806 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 EFHC2Q5JST6 749 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 FYB2Q5VWT5 728 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 SEPT14Q6ZU15 432 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 C10orf82Q8WW14 230 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 ELMO3Q96BJ8 720 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 ALKBH8Q96BT7 664 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 PAIP2Q9BPZ3 127 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 TUBB6Q9BUF5 446 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 TLE6Q9H808 572 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 CYLDQ9NQC7 956 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms