RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TRIM13O60858 407 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 P4HBP07237 508 aaKnown RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 SCTRP47872 440 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PSMC6P62333 389 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 CCDC81Q6ZN84 652 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 SEPT1Q8WYJ6 367 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 TNIP3Q96KP6 325 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 CALB2P22676 271 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PLEKHA7Q6IQ23 1121 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PID1Q7Z2X4 250 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 ARHGEF38Q9NXL2 777 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PCSK1NQ9UHG2 260 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 CAND2O75155 1236 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 GPSM2P81274 684 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 EIF2B5Q13144 721 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 NAIF1Q69YI7 327 aaPredicted RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 AGR3Q8TD06 166 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 DBR1Q9UK59 544 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 PNMA8CA0A1B0GUJ8 204 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 CENPXA8MT69 81 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 TLR2O60603 784 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 WEE2P0C1S8 567 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 TALDO1P37837 337 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 MAGEA4P43358 317 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 NCF4Q15080 339 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 PKN2Q16513 984 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 GLYCTKQ8IVS8 523 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 TIPINQ9BVW5 301 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 NEO1Q92859 1461 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 KIAA0556O60303 1618 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 PDXKO00764 312 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 SRGNP10124 158 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 LTKP29376 864 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 TRIM25Q14258 630 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 USP10Q14694 798 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 SGSM1Q2NKQ1 1148 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 SCUBE1Q8IWY4 988 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 DHX35Q9H5Z1 703 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 XPO7Q9UIA9 1087 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 RGS5O15539 181 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 QARSP47897 775 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 HSD17B4P51659 736 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 MAPRE1Q15691 268 aaKnown RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 RSBN1Q5VWQ0 802 aaPredicted RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 CCDC80Q76M96 950 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 FAM9CQ8IZT9 166 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 FRMD8P1Q9BZ68 369 aaPredicted RBP13.41□□□□□ -0.26
SMC4-202ENST00000357388 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
SMC4-202ENST00000357388 CDK17Q00537 523 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 PCNX4Q63HM2 1172 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 C4orf33Q8N1A6 199 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ERP44Q9BS26 406 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 STK33Q9BYT3 514 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ETAA1Q9NY74 926 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SYNDIG1LA6NDD5 238 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ECE2O60344 883 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 EFNA5P52803 228 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 PIGHQ14442 188 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 COG2Q14746 738 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ANO4Q32M45 955 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 SVOPQ8N4V2 548 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 MYCBPAPQ8TBZ2 947 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SPATA33Q96N06 139 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 PRRG3Q9BZD7 231 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 KLHL3Q9UH77 587 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 MED26O95402 600 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ATXN3P54252 364 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 SNAP25P60880 206 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 PSMC5P62195 406 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 PRKCQQ04759 706 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 FAM102AQ5T9C2 384 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 RNPEPQ9H4A4 650 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 EFCAB1Q9HAE3 211 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 A8MXQ7 604 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 POTECB2RU33 542 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms