RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MAGEB18Q96M61 343 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 NT5C1BQ96P26 610 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 CSRNP1Q96S65 589 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 C11orf70Q9BRQ4 267 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM206Q9H813 350 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 FBXO28Q9NVF7 368 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 CYP39A1Q9NYL5 469 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZNF148Q9UQR1 794 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC4A7Q9Y6M7 1214 aa8.71□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP8B3O60423 1300 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 GOLGA8RI6L899 631 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 HNRNPRO43390 633 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ENTPD5O75356 428 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 HNRNPCP07910 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 GZMAP12544 262 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SKIP12755 728 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SH3BGRP55822 239 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 MTFR1Q15390 333 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC15A2Q16348 729 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CYP1B1Q16678 543 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PLA2G4FQ68DD2 849 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PPP1R21Q6ZMI0 780 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ASRGL1Q7L266 308 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SH3BP5LQ7L8J4 393 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM71AQ8IYT1 594 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CPXCR1Q8N123 301 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SMYD1Q8NB12 490 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 LRRC8CQ8TDW0 803 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 GRK7Q8WTQ7 553 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 WDR11Q9BZH6 1224 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 KIAA1683Q9H0B3 1180 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TXLNGQ9NUQ3 528 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TUBGCP4Q9UGJ1 667 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CIDEBQ9UHD4 219 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 COL14A1Q05707 1796 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 NVLO15381 856 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SORBS3O60504 671 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 GYS1P13807 737 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ETS1P14921 441 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAGEA4P43358 317 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CDR2Q01850 454 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 OVGP1Q12889 678 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PPP2R5CQ13362 524 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FASTKD3Q14CZ7 662 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TNFAIP8L3Q5GJ75 292 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ASAP3Q8TDY4 903 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 POMGNT1Q8WZA1 660 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM136AQ96C01 138 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SMC6Q96SB8 1091 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 KLF6Q99612 283 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TIPINQ9BVW5 301 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 C12orf65Q9H3J6 166 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PCDH18Q9HCL0 1135 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 NPHS2Q9NP85 383 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PDP2Q9P2J9 529 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 UVRAGQ9P2Y5 699 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 USH1CQ9Y6N9 552 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 UTRNP46939 3433 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FSCN2O14926 492 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PEX11AO75192 247 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 BANF1O75531 89 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 NSFP46459 744 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCDC6Q16204 474 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PKN2Q16513 984 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CNPY1Q3B7I2 92 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CRY2Q49AN0 593 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 C1orf220Q5T0J3 134 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM182AQ5T1J6 154 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 KRT39Q6A163 491 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 RFX8Q6ZV50 586 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ANKMY2Q8IV38 441 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZBED8Q8IZ13 594 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCDC89Q8N998 374 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 PSPC1Q8WXF1 523 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC35B4Q969S0 331 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TRABDQ9H4I3 376 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 BARX2Q9UMQ3 279 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 CHMP2BQ9UQN3 213 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZHX2Q9Y6X8 837 aa8.7□□□□□ -1.02
CDC42SE1-201ENST00000357235 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 SMCHD1A6NHR9 2005 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 A0A0G2JND7 137 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAGEA13PA6NCF6 341 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 TCP10L2B9ZVM9 353 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 SOCS7O14512 581 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAPK13O15264 365 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 CYP1A2P05177 515 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 PLS3P13797 630 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZFXP17010 805 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 IVDP26440 423 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 RPA3P35244 121 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 NOP14P78316 857 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 XKR9Q5GH70 373 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 ACAD10Q6JQN1 1059 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms