RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 M0R3G1 203 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 CST8O60676 142 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 TARSP26639 723 aaKnown RBP15.53■□□□□ 0.08
CHD4-201ENST00000357008 SH3TC2Q8TF17 1288 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 PRPF18Q99633 342 aaKnown RBP15.53■□□□□ 0.08
CHD4-201ENST00000357008 VCPKMTQ9H867 229 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
CHD4-201ENST00000357008 TFR2Q9UP52 801 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 DSG1Q02413 1049 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 PAPD7Q5XG87 772 aaKnown RBP15.53■□□□□ 0.08
CHD4-201ENST00000357008 TMBIM4Q9HC24 238 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 PHTF1Q9UMS5 762 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 AGAP1Q9UPQ3 857 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 ADCY10Q96PN6 1610 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 LOC100653049A0A140TA62 436 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 KRT34O76011 436 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 LAMB3Q13751 1172 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 ZNF507Q8TCN5 953 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 TEKT4Q8WW24 435 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 MED15Q96RN5 788 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 SCTRP47872 440 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 STAT5BP51692 787 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 DEFA1P59665 94 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 DEFA3P59666 94 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 BCORL1Q5H9F3 1711 aa15.53■□□□□ 0.08
CHD4-201ENST00000357008 NBPF26B4DH59 902 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 NNMTP40261 264 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 FAM182BQ5T319 152 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 ARID3BQ8IVW6 561 aaPredicted RBP15.52■□□□□ 0.08
CHD4-201ENST00000357008 NBPF15Q8N660 670 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 GANCQ8TET4 914 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 FAM118BQ9BPY3 351 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 ABCA8O94911 1581 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 CPA2P48052 419 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
CHD4-201ENST00000357008 PPP1R2P1Q96PQ5 205 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 NAGPAQ9UK23 515 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 CNTNAP5Q8WYK1 1306 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 RPA1P27694 616 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 RAD51Q06609 339 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
CHD4-201ENST00000357008 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
CHD4-201ENST00000357008 FEZF2Q8TBJ5 459 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 ZSWIM1Q9BR11 485 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 TSR3Q9UJK0 312 aaKnown RBP15.52■□□□□ 0.08
CHD4-201ENST00000357008 AXIN2Q9Y2T1 843 aa15.52■□□□□ 0.08
CHD4-201ENST00000357008 XPO1O14980 1071 aaKnown RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 TCN1P20061 433 aaPredicted RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 RCN1Q15293 331 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 SUGP1Q8IWZ8 645 aaKnown RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 CALML6Q8TD86 181 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 MAGEB18Q96M61 343 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 O00370 1275 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 C21orf2O43822 256 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 RALAP11233 206 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 ANO4Q32M45 955 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 ZC2HC1CQ53FD0 456 aaPredicted RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 FAM32AQ9Y421 112 aaKnown RBP15.52■□□□□ 0.07
CHD4-201ENST00000357008 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.07
CHD4-201ENST00000357008 CAND2O75155 1236 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 ATXN3P54252 364 aaPredicted RBP15.51■□□□□ 0.07
CHD4-201ENST00000357008 PDK1Q15118 436 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 KCNV1Q6PIU1 500 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 EFCAB14O75071 495 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 HLA-DRAP01903 254 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 RGS7P49802 495 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 RBM43Q6ZSC3 357 aaKnown RBP15.51■□□□□ 0.07
CHD4-201ENST00000357008 SPATA17Q96L03 361 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 TET3O43151 1660 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 RUNX1T1Q06455 604 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 FIGNQ5HY92 759 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 KDELC2Q7Z4H8 507 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 URGCPQ8TCY9 931 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 DDI1Q8WTU0 396 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 SCFD2Q8WU76 684 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 SCN3BQ9NY72 215 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 PLEKP08567 350 aaPredicted RBP15.51■□□□□ 0.07
CHD4-201ENST00000357008 VCAM1P19320 739 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 GRIN1Q05586 938 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 TJAP1Q5JTD0 557 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 NLRP9Q7RTR0 991 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 KCNB2Q92953 911 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 PSMD7P51665 324 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 ZCWPW2Q504Y3 356 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 HPS5Q9UPZ3 1129 aa15.51■□□□□ 0.07
CHD4-201ENST00000357008 TRIM49D1C9J1S8 452 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 RARGP13631 454 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 ADRA2BP18089 450 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 ELMSAN1Q6PJG2 1045 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 RFWD2Q8NHY2 731 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 HEY2Q9UBP5 337 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SPATA31A3Q5VYP0 1347 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms