RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CDK16Q00536 496 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 ZBTB17Q13105 803 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 STAT4Q14765 748 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 NONOQ15233 471 aaKnown RBP eCLIP16.58■□□□□ 0.24
RTN3-205ENST00000356000 GPR162Q16538 588 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 TRPC4APQ8TEL6 797 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 TSG101Q99816 390 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 GPATCH1Q9BRR8 931 aaKnown RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 PARVBQ9HBI1 364 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 NINJ2Q9NZG7 142 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 RSL24D1Q9UHA3 163 aaKnown RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ATMINO43313 823 aaPredicted RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 XPOTO43592 962 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 TFPTP0C1Z6 253 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 PTPN2P17706 415 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 GALCP54803 685 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ANKDD1AQ495B1 522 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 C1orf146Q5VVC0 180 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 FAAH2Q6GMR7 532 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 CABP7Q86V35 215 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 WDR75Q8IWA0 830 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 AHI1Q8N157 1196 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 CCDC77Q9BR77 488 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 FBXO6Q9NRD1 293 aaPredicted RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 ITM2AO43736 263 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 PEX1O43933 1283 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 CNOT3O75175 753 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 GGPS1O95749 300 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ATP6V1B1P15313 513 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 TMED2Q15363 201 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 TLR1Q15399 786 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 SEC23AQ15436 765 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ZNF394Q53GI3 561 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 AADACL2Q6P093 401 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 KYAT3Q6YP21 454 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 RFFLQ8WZ73 363 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 SLC38A7Q9NVC3 462 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 ADAMTS6Q9UKP5 1117 aa16.57■□□□□ 0.24
RTN3-205ENST00000356000 MTO1Q9Y2Z2 717 aaKnown RBP16.57■□□□□ 0.24
RTN3-205ENST00000356000 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 PVALEFA0A1B0GWK0 134 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 TNFAIP8O95379 198 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 PEX2P28328 305 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CDK9P50750 372 aaKnown RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 CREB5Q02930 508 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 KCNC4Q03721 635 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 FAM209AQ5JX71 171 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 NIPAL1Q6NVV3 410 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 TRIM59Q8IWR1 403 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 PPP1R14CQ8TAE6 165 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 ITGB4P16144 1822 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 A0A0G2JND7 137 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CHRNB2P17787 502 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CDH3P22223 829 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 RPS3AP61247 264 aaKnown RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 ZBTB16Q05516 673 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CYTH1Q15438 398 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 ANO5Q75V66 913 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 ICA1LQ8NDH6 482 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 SCFD1Q8WVM8 642 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 EME1Q96AY2 570 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 EFHD2Q96C19 240 aaPredicted RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
RTN3-205ENST00000356000 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
RTN3-205ENST00000356000 TPPPO94811 219 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 PABPC1P11940 636 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 GNA11P29992 359 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 FDFT1P37268 417 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 HIRAP54198 1017 aaPredicted RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms