RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 FAM26DQ5JW98 314 aa24.35■■□□□ 1.49
SCAMP3-202ENST00000355379 NAA35Q5VZE5 725 aa24.35■■□□□ 1.49
SCAMP3-202ENST00000355379 TWF2Q6IBS0 349 aaKnown RBP24.35■■□□□ 1.49
SCAMP3-202ENST00000355379 ZNF518BQ9C0D4 1074 aa24.35■■□□□ 1.49
SCAMP3-202ENST00000355379 CXCL16Q9H2A7 254 aa24.35■■□□□ 1.49
SCAMP3-202ENST00000355379 CYP3A5P20815 502 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 AKAP5P24588 427 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 CXCR5P32302 372 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 CDH5P33151 784 aaPredicted RBP24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 TNNC1P63316 161 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 CFAP221Q4G0U5 840 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 CCDC181Q5TID7 509 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 LHX8Q68G74 356 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 MON1BQ7L1V2 547 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 ZNF564Q8TBZ8 553 aaPredicted RBP24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 CPA5Q8WXQ8 436 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 NUP85Q9BW27 656 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 GOLPH3Q9H4A6 298 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 SMYD3Q9H7B4 428 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 PARP2Q9UGN5 583 aa24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 PACSIN2Q9UNF0 486 aaPredicted RBP24.34■■□□□ 1.49
SCAMP3-202ENST00000355379 TLR3O15455 904 aaKnown RBP24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 MED7O43513 233 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 CAND2O75155 1236 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 CILPO75339 1184 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 CFHP08603 1231 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 GRK4P32298 578 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 RAP1GAPP47736 663 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 RAD23BP54727 409 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 C1QBPQ07021 282 aaKnown RBP24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 INCA1Q0VD86 236 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 TMEM130Q8N3G9 435 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 GLT1D1Q96MS3 346 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 RPS6KC1Q96S38 1066 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 APOL6Q9BWW8 343 aa24.33■■□□□ 1.49
SCAMP3-202ENST00000355379 SCN1AP35498 2009 aa24.33■■□□□ 1.48
SCAMP3-202ENST00000355379 SMIM28A0A1B0GU29 152 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 CTSHP09668 335 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 BRD2P25440 801 aaKnown RBP24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 THPOP40225 353 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 CDH8P55286 799 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 TRIM71Q2Q1W2 868 aaKnown RBP24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 ZNF394Q53GI3 561 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 LIN9Q5TKA1 542 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 HACE1Q8IYU2 909 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 WHAMMQ8TF30 809 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 PSMB7Q99436 277 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 SELENOOQ9BVL4 669 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 RNF39Q9H2S5 420 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 ERVK-5Q9HDB9 667 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 TUBGCP4Q9UGJ1 667 aa24.32■■□□□ 1.48
SCAMP3-202ENST00000355379 ATMINO43313 823 aaPredicted RBP24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 ATF7P17544 494 aaPredicted RBP24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 PTP4A2Q12974 167 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 C9orf57Q5W0N0 161 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 TMEM35BQ8NCS4 154 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 MSANTD4Q8NCY6 345 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 TMEM176AQ96HP8 235 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 ZSWIM1Q9BR11 485 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 LHX5Q9H2C1 402 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 BARX2Q9UMQ3 279 aaPredicted RBP24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 ALG6Q9Y672 507 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 SQORQ9Y6N5 450 aa24.31■■□□□ 1.48
SCAMP3-202ENST00000355379 MIF4GDA9UHW6 222 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 PIRO00625 290 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 KCNK3O14649 394 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 FBXO47Q5MNV8 452 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 PASD1Q8IV76 773 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 MMGT1Q8N4V1 131 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 SLC43A3Q8NBI5 491 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 SLC4A11Q8NBS3 891 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 NOA1Q8NC60 698 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 ARRDC4Q8NCT1 418 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 TFAP2BQ92481 460 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 C18orf25Q96B23 403 aaPredicted RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 FAM105AQ9NUU6 356 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 ADAM22Q9P0K1 906 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 KIAA1257Q9ULG3 409 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 CEP83Q9Y592 693 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 FAM170AA1A519 330 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 DDX3YO15523 660 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 H2AFXP16104 143 aaPredicted RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 ZSCAN20P17040 1043 aaPredicted RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 MMP8P22894 467 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 PNPLA4P41247 253 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 NFX1Q12986 1120 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 GLRA4Q5JXX5 417 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 USP38Q8NB14 1042 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 SPATA4Q8NEY3 305 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 ACTRT1Q8TDG2 376 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 TRAIPQ9BWF2 469 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 ELOVL4Q9GZR5 314 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 MRPL47Q9HD33 250 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 KLK14Q9P0G3 267 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 NOD1Q9Y239 953 aa24.3■■□□□ 1.48
SCAMP3-202ENST00000355379 TUBBP07437 444 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 VDRP11473 427 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 RRM1P23921 792 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 HTRA3P83110 453 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms