RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SARS2Q9NP81 518 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 POLE3Q9NRF9 147 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 TRIM49D1C9J1S8 452 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 NMT2O60551 498 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 CSTF3Q12996 717 aaKnown RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 RASA2Q15283 850 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 MARCH10Q8NA82 808 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 TOPORSQ9NS56 1045 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 UBA6A0AVT1 1052 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 TM9SF1O15321 606 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 GLRA3O75311 464 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 GSNP06396 782 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 POLBP06746 335 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 IYDQ6PHW0 289 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZNF677Q86XU0 584 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZFYVE19Q96K21 471 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 NDEL1Q9GZM8 345 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 UBAP1Q9NZ09 502 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 BBOX1O75936 387 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 PYGMP11217 842 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC9A1P19634 815 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 DAPK2Q9UIK4 370 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 C3orf70A6NLC5 250 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 MAP2K7O14733 419 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 ELF3P78545 371 aaPredicted RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 EPHA7Q15375 998 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 PCNX4Q63HM2 1172 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 CCDC81Q6ZN84 652 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 ASAP3Q8TDY4 903 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 GLMNQ92990 594 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 RSAD1Q9HA92 442 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 MCM8Q9UJA3 840 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 MYMKA6NI61 221 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 PSMC5P62195 406 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 MEI1Q5TIA1 1274 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 BTBD10Q9BSF8 475 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 AGO2Q9UKV8 859 aaKnown RBP13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
SYNCRIP-201ENST00000355238 F8VZ95 297 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 ASNA1O43681 348 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 HERVK_113P62684 666 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 SMAD1Q15797 465 aaKnown RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 CCDC142Q17RM4 750 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 LRRC6Q86X45 466 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 IGDCC4Q8TDY8 1250 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 CPA5Q8WXQ8 436 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAR2Q96K12 515 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM120AQ9BXJ8 343 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM2Q9UHN6 1383 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 SAMD9Q5K651 1589 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 HUS1O60921 280 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 RGS2P41220 211 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 ROR2Q01974 943 aaKnown RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 BEST2Q8NFU1 509 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 PHF21AQ96BD5 680 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCND2Q9NZV8 630 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.28
SYNCRIP-201ENST00000355238 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 GYS1P13807 737 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 NMT1P30419 496 aaKnown RBP13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 SIK1P57059 783 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 PTK2BQ14289 1009 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 RIN3Q8TB24 985 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 ARHGEF38Q9NXL2 777 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 NAGPAQ9UK23 515 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 BCL10O95999 233 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 ATP4AP20648 1035 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 MSL3Q8N5Y2 521 aaKnown RBP13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 PTPRN2Q92932 1015 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 OMA1Q96E52 524 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 WNK4Q96J92 1243 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 PPP1R2P1Q96PQ5 205 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 RIC8BQ9NVN3 520 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 DCDC2Q9UHG0 476 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms