RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MMEP08473 750 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 MARCKSL1P49006 195 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 VAMP7P51809 220 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 IFI35P80217 286 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-204ENST00000353317 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM62Q0P6H9 643 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 XRCC4Q13426 336 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 DHX34Q14147 1143 aaKnown RBP9.17□□□□□ -0.94
TRIM55-204ENST00000353317 MYBPC2Q14324 1141 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 GRIK4Q16099 956 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 SNCBQ16143 134 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 ARHGAP44Q17R89 818 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 DENND2CQ68D51 928 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
TRIM55-204ENST00000353317 SOCS4Q8WXH5 440 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 KRT35Q92764 455 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 HVCN1Q96D96 273 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 BICD1Q96G01 975 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 FDXACB1Q9BRP7 624 aaPredicted RBP9.17□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM117Q9H0C3 514 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 SEMA4AQ9H3S1 761 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 GRHL1Q9NZI5 618 aa9.17□□□□□ -0.94
TRIM55-204ENST00000353317 SCN10AQ9Y5Y9 1956 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 FAM187AA6NFU0 413 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PGK1P00558 417 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 F2P00734 622 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PIGRP01833 764 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 KRT13P13646 458 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 TNFAIP3P21580 790 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 FGFR4P22455 802 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CCND3P30281 292 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PTGIRP43119 386 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 DRG2P55039 364 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 FCGRTP55899 365 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PREPLQ4J6C6 727 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 EEF1DP3Q658K8 133 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM192Q8IY95 271 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CEP120Q8N960 986 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 MFSD14AQ96MC6 490 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SELENOSQ9BQE4 189 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 INTS2Q9H0H0 1204 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 ANKFY1Q9P2R3 1169 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 TPX2Q9ULW0 747 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CASP8AP2Q9UKL3 1982 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 A0A0B4J269 797 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CCDC172P0C7W6 258 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SMIM10L2AP0DMW4 78 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SMIM10L2BP0DMW5 78 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 YY1P25490 414 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 RPL21P46778 160 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 LIG4P49917 911 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 ADAM17P78536 824 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SP3Q02447 781 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 MBTD1Q05BQ5 628 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CYP24A1Q07973 514 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 AMHR2Q16671 573 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 ZNF484Q5JVG2 852 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 WLSQ5T9L3 541 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 TTC27Q6P3X3 843 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PRELID2Q8N945 189 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SLC17A8Q8NDX2 589 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 UHMK1Q8TAS1 419 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 SLC20A1Q8WUM9 679 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 KAT5Q92993 513 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 ACO2Q99798 780 aaKnown RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 FZD8Q9H461 694 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CHORDC1Q9UHD1 332 aaPredicted RBP9.16□□□□□ -0.94
TRIM55-204ENST00000353317 EXOC7Q9UPT5 735 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 PCDHA3Q9Y5H8 950 aa9.16□□□□□ -0.94
TRIM55-204ENST00000353317 CCT8L1PA6NM43 557 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 HAS3O00219 553 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 PHF2O75151 1096 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 GHRP10912 638 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 HARSP12081 509 aaKnown RBP9.15□□□□□ -0.94
TRIM55-204ENST00000353317 GARTP22102 1010 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 MAP2K1Q02750 393 aaPredicted RBP9.15□□□□□ -0.94
TRIM55-204ENST00000353317 MXD4Q14582 209 aaPredicted RBP9.15□□□□□ -0.94
TRIM55-204ENST00000353317 KIF22Q14807 665 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 PPP2R5AQ15172 486 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 PIGWQ7Z7B1 504 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 ARHGEF19Q8IW93 802 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 GPD1LQ8N335 351 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 P3H4Q92791 437 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.94
TRIM55-204ENST00000353317 PTPRHQ9HD43 1115 aa9.15□□□□□ -0.94
TRIM55-204ENST00000353317 AGO2Q9UKV8 859 aaKnown RBP9.15□□□□□ -0.94
TRIM55-204ENST00000353317 INO80B-WBP1J3KQ70 363 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 RGS16O15492 202 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 TREHO43280 583 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 MGRN1O60291 552 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms