RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ALDH18A1P54886 795 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 TMEM62Q0P6H9 643 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PABPC1LQ4VXU2 614 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 EPC2Q52LR7 807 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SLC30A10Q6XR72 485 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF804AQ7Z570 1209 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ALYREFQ86V81 257 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PIP4K2CQ8TBX8 421 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 RBM17Q96I25 401 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 TLE6Q9H808 572 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SLC17A7Q9P2U7 560 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 FRMPD4Q14CM0 1322 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 FAM237BA0A1B0GVD1 139 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 FSCN2O14926 492 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF189O75820 626 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ASLP04424 464 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 BMP3P12645 472 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 MUTP22033 750 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ADARP55265 1226 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ARL4CP56559 192 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 CDK16Q00536 496 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PARP10Q53GL7 1025 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ODR4Q5SWX8 454 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 TBC1D9BQ66K14 1250 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SYDE1Q6ZW31 735 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 RAPH1Q70E73 1250 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SLC47A2Q86VL8 602 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ZC3H3Q8IXZ2 948 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ADGRF4Q8IZF3 695 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 AGBL1Q96MI9 1066 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PSMC3IPQ9P2W1 217 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PPM1HQ9ULR3 514 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ATP8B3O60423 1300 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 DOCK2Q92608 1830 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PNMA6FA0A0J9YX94 578 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC195A0A1B0GUA6 201 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PI4K2BG5E9Z4 385 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TP73O15350 636 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PRPF4O43172 522 aaKnown RBP eCLIP8.04□□□□□ -1.125e-17■■■■■ 29.7
BRCA1-201ENST00000352993 LPXNO60711 386 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TCEA3O75764 348 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PENKP01210 267 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CALCAP01258 141 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 MT-ND3P03897 115 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 BGNP21810 368 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 IVDP26440 423 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 ARSEP51690 589 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 KIF22Q14807 665 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TRIP10Q15642 601 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 RBM44Q6ZP01 1051 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 STXBP4Q6ZWJ1 553 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 NOP9Q86U38 636 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 OR6Y1Q8NGX8 325 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 NEDD1Q8NHV4 660 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 OXNAD1Q96HP4 312 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 SLC4A9Q96Q91 983 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 GPR88Q9GZN0 384 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 NMUR2Q9GZQ4 415 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 MEI4A8MW99 385 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 I3L4J1 428 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 ETS1P14921 441 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 BFSP1Q12934 665 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CYLC2Q14093 348 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 EFTUD2Q15029 972 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 NKX1-1Q15270 411 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CTC1Q2NKJ3 1217 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 RBM15BQ8NDT2 890 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 STKLD1Q8NE28 680 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC127Q96BQ5 260 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PTCD3Q96EY7 689 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 FAM111AQ96PZ2 611 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 ANO3Q9BYT9 981 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TMEM117Q9H0C3 514 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CYP4F11Q9HBI6 524 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 FAF1Q9UNN5 650 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 DOT1LQ8TEK3 1739 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TRPA1O75762 1119 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 SSTR1P30872 391 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 DLG4P78352 724 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TRMT5Q32P41 509 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 C3orf67Q6ZVT6 689 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CENPUQ71F23 418 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PRPF39Q86UA1 669 aaKnown RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 TMPRSS6Q8IU80 811 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-201ENST00000352993 FBXO27Q8NI29 283 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PYROXD1Q8WU10 500 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 CATSPER2Q96P56 530 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 HERPUD2Q9BSE4 406 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 RIOX1Q9H6W3 641 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 JMJD4Q9H9V9 463 aa8.04□□□□□ -1.12
BRCA1-201ENST00000352993 PARVGQ9HBI0 331 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms