RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PCMTD1Q96MG8 357 aaPredicted RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 WDR24Q96S15 920 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 IWS1Q96ST2 819 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 MPHOSPH6Q99547 160 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 CHP1Q99653 195 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 OSBPL6Q9BZF3 934 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 TSGA10Q9BZW7 698 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 ZHX3Q9H4I2 956 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 HAUS4Q9H6D7 363 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 PLCB1Q9NQ66 1216 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 DMAC2Q9NW81 257 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 ARMCX3Q9UH62 379 aaPredicted RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 PUF60Q9UHX1 559 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 FBXL5Q9UKA1 691 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 MYO6Q9UM54 1294 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 REXO2Q9Y3B8 237 aaKnown RBP8.9□□□□□ -0.98
CD44-205ENST00000352818 PCDHB13Q9Y5F0 798 aa8.9□□□□□ -0.98
CD44-205ENST00000352818 EIF3JO75822 258 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 IPO7O95373 1038 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 AFPP02771 609 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 KCNA2P16389 499 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 LAG3P18627 525 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 TARSP26639 723 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 SNRPFP62306 86 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 GPC5P78333 572 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 ZNF252P-AS1Q0IIN9 211 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 UBXN2BQ14CS0 331 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 GNPTABQ3T906 1256 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 MARCH8Q5T0T0 291 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 PADI6Q6TGC4 694 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 PROSER1Q86XN7 944 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 DAW1Q8N136 415 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 ZNF710Q8N1W2 664 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 TXLNBQ8N3L3 684 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 DNAJB3Q8WWF6 145 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 EEF2KMTQ96G04 330 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 FTHL17Q9BXU8 183 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 FAM126AQ9BYI3 521 aaPredicted RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 GANQ9H2C0 597 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 NHEJ1Q9H9Q4 299 aaPredicted RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 LTB4R2Q9NPC1 389 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 LARSQ9P2J5 1176 aaKnown RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 ZNF215Q9UL58 517 aaPredicted RBP8.89□□□□□ -0.99
CD44-205ENST00000352818 RAB23Q9ULC3 237 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
CD44-205ENST00000352818 SDK1Q7Z5N4 2213 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 FNDC1Q4ZHG4 1894 aaPredicted RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 EFCAB8A8MWE9 144 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 DDX39AO00148 427 aaKnown RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 ZBTB39O15060 712 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 EPHB6O15197 1021 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 MAPK13O15264 365 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 KRT86O43790 486 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 RRP9O43818 475 aaKnown RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 NOL4O94818 638 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 CXCL14O95715 111 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 CCNE2O96020 404 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 GNAT1P11488 350 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 MYCLP12524 364 aaPredicted RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 PLS3P13797 630 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 ANXA13P27216 316 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 YWHABP31946 246 aaKnown RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 PSMC2P35998 433 aaKnown RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 NOVA1P51513 510 aaKnown RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 VAV2P52735 878 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 KCNH2Q12809 1159 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 PPP2R5AQ15172 486 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 AASDHQ4L235 1098 aaPredicted RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 ODR4Q5SWX8 454 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 DPY19L2P1Q6NXN4 242 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 HS2ST1Q7LGA3 356 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 TMEM173Q86WV6 379 aaPredicted RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 SLC39A11Q8N1S5 342 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 KCNN1Q92952 543 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 SLC35C1Q96A29 364 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 GBP3Q9H0R5 595 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 ZBP1Q9H171 429 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 TMEM206Q9H813 350 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 MMRN2Q9H8L6 949 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 SFXN1Q9H9B4 322 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 C17orf75Q9HAS0 396 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 LZTFL1Q9NQ48 299 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 AGPAT3Q9NRZ7 376 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 FAM207AQ9NSI2 230 aaPredicted RBP8.88□□□□□ -0.99
CD44-205ENST00000352818 ARHGAP20Q9P2F6 1191 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 PCDHA10Q9Y5I2 948 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 NUMBLQ9Y6R0 609 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 DOCK8Q8NF50 2099 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 APC2O95996 2303 aa8.88□□□□□ -0.99
CD44-205ENST00000352818 COL12A1Q99715 3063 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 IGSF9BQ9UPX0 1349 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 C2orf16Q68DN1 1984 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 ANO9A1A5B4 782 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 MBLAC1A4D2B0 266 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 CTAGE9A4FU28 777 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms