RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MMS19Q96T76 1030 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 MTIF3Q9H2K0 278 aaKnown RBP28.97■■■□□ 2.23
SSBP4-202ENST00000348495 SLC11A1P49279 550 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 TIGD5Q53EQ6 642 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 TMEM139Q8IV31 216 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 NRP1O14786 923 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 GALTP07902 379 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 CDK17Q00537 523 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 INCA1Q0VD86 236 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 TSR1Q2NL82 804 aaKnown RBP28.96■■■□□ 2.23
SSBP4-202ENST00000348495 HGSNATQ68CP4 663 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 DPH6Q7L8W6 267 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 FMNL3Q8IVF7 1028 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 HERC6Q8IVU3 1022 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 TOP6BLQ8N6T0 577 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 YME1L1Q96TA2 773 aa28.96■■■□□ 2.23
SSBP4-202ENST00000348495 PRG3Q9Y2Y8 225 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-202ENST00000348495 TACC1O75410 805 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 GFPT2O94808 682 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 ALDH2P05091 517 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 FERP16591 822 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 ZNF132P52740 706 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 YWHAEP62258 255 aaKnown RBP28.95■■■□□ 2.23
SSBP4-202ENST00000348495 BTG3Q14201 252 aaPredicted RBP28.95■■■□□ 2.23
SSBP4-202ENST00000348495 SENP8Q96LD8 212 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 MARCH5Q9NX47 278 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 L1RE1Q9UN81 338 aa28.95■■■□□ 2.23
SSBP4-202ENST00000348495 CYB561D2O14569 222 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 ATP2A2P16615 1042 aaKnown RBP28.94■■■□□ 2.22
SSBP4-202ENST00000348495 CD58P19256 250 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 BCAR1P56945 870 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 ASIC2Q16515 512 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 C9orf50Q5SZB4 431 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 MRPL45Q9BRJ2 306 aaKnown RBP28.94■■■□□ 2.22
SSBP4-202ENST00000348495 KCNF1Q9H3M0 494 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 PCDHB4Q9Y5E5 795 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 CEP290O15078 2479 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 M0QZQ0 153 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 CILPO75339 1184 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 FAM163BP0C2L3 166 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 CLCN1P35523 988 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 PRKCIP41743 596 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 BRCC3P46736 316 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 TMEM270Q6UE05 265 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 GPIHBP1Q8IV16 184 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 TTC39CQ8N584 583 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 APPL2Q8NEU8 664 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 WHAMMQ8TF30 809 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 HASPINQ8TF76 798 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 KBTBD7Q8WVZ9 684 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 SUSD3Q96L08 255 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 BAG1Q99933 345 aaPredicted RBP28.94■■■□□ 2.22
SSBP4-202ENST00000348495 ZNHIT6Q9NWK9 470 aaKnown RBP28.94■■■□□ 2.22
SSBP4-202ENST00000348495 FAN1Q9Y2M0 1017 aa28.94■■■□□ 2.22
SSBP4-202ENST00000348495 CYP26A1O43174 497 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 HUS1O60921 280 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 KRT5P13647 590 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 USP8P40818 1118 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 ARID5AQ03989 594 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 PDCL2Q8N4E4 241 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 COLEC11Q9BWP8 271 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 BARX2Q9UMQ3 279 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-202ENST00000348495 INSL6Q9Y581 213 aa28.93■■■□□ 2.22
SSBP4-202ENST00000348495 MRPL42Q9Y6G3 142 aaKnown RBP28.93■■■□□ 2.22
SSBP4-202ENST00000348495 SERPING1P05155 500 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 CCZ1BP86790 482 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 CCZ1P86791 482 aaPredicted RBP28.92■■■□□ 2.22
SSBP4-202ENST00000348495 DSTYKQ6XUX3 929 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 RBBP8NLQ8NC74 664 aaPredicted RBP28.92■■■□□ 2.22
SSBP4-202ENST00000348495 CCDC112Q8NEF3 446 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 SP7Q8TDD2 431 aaPredicted RBP28.92■■■□□ 2.22
SSBP4-202ENST00000348495 CHP1Q99653 195 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 ARHGAP20Q9P2F6 1191 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 ADAM28Q9UKQ2 775 aa28.92■■■□□ 2.22
SSBP4-202ENST00000348495 SKILP12757 684 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 GDF15Q99988 308 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 HMGXB4Q9UGU5 601 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 NME7Q9Y5B8 376 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 I3L4J1 428 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 CYP11A1P05108 521 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 CCDC172P0C7W6 258 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 PBX3P40426 434 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 SHHQ15465 462 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 WSCD1Q658N2 575 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 TMEM173Q86WV6 379 aaPredicted RBP28.91■■■□□ 2.22
SSBP4-202ENST00000348495 ZNF830Q96NB3 372 aaPredicted RBP28.91■■■□□ 2.22
SSBP4-202ENST00000348495 RAD9AQ99638 391 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 ZBED2Q9BTP6 218 aa28.91■■■□□ 2.22
SSBP4-202ENST00000348495 TSC2P49815 1807 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 TADA2AO75478 443 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 LINC00271P0C7V0 271 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 WARSP23381 471 aaKnown RBP28.9■■■□□ 2.22
SSBP4-202ENST00000348495 ALDH7A1P49419 539 aaKnown RBP28.9■■■□□ 2.22
SSBP4-202ENST00000348495 RGS19P49795 217 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 KLHL30Q0D2K2 578 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 SLC47A2Q86VL8 602 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 TMTC1Q8IUR5 882 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 ADGRF2Q8IZF7 708 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 TWNKQ96RR1 684 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 SYT11Q9BT88 431 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms