RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ANKRD20A4Q4UJ75 823 aa15.52■□□□□ 0.07
NUP50-201ENST00000347635 ANKRD20A2Q5SQ80 823 aa15.52■□□□□ 0.07
NUP50-201ENST00000347635 ANKRD20A1Q5TYW2 823 aa15.52■□□□□ 0.07
NUP50-201ENST00000347635 IQCKQ8N0W5 287 aa15.52■□□□□ 0.07
NUP50-201ENST00000347635 HAS1Q92839 578 aa15.52■□□□□ 0.07
NUP50-201ENST00000347635 MOV10L1Q9BXT6 1211 aaKnown RBP15.52■□□□□ 0.07
NUP50-201ENST00000347635 DDTLA6NHG4 134 aaPredicted RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 KLC1Q07866 573 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 PPP6R3Q5H9R7 873 aaPredicted RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 OR6J1Q8NGC5 347 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 DNAJC9Q8WXX5 260 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 SLC13A1Q9BZW2 595 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 RANBP17Q9H2T7 1088 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 RXFP1Q9HBX9 757 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 SMYD2Q9NRG4 433 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 SLIT2O94813 1529 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 NVLO15381 856 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 MXD4Q14582 209 aaPredicted RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 HIPK4Q8NE63 616 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 GSDMBQ8TAX9 411 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 RAET1EQ8TD07 263 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 ARHGEF26Q96DR7 871 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 CBWD1Q9BRT8 395 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 GBA2Q9HCG7 927 aaPredicted RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 PPFIA2O75334 1257 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 ACOT2P49753 483 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 PIGHQ14442 188 aaPredicted RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 PRPSAP1Q14558 356 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 RGS9BPQ6ZS82 235 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 SLC47A2Q86VL8 602 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 DNAAF3Q8N9W5 541 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 ATXN2LQ8WWM7 1075 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 TBX20Q9UMR3 447 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 HLA-DRAP01903 254 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 SEPT6Q14141 434 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 MYBPC2Q14324 1141 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 Q3C1V9 767 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 RFX8Q6ZV50 586 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 TTC1Q99614 292 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 M0QYV0 167 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 HSPA4LO95757 839 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 TTC4O95801 387 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 CASP5P51878 434 aa15.51■□□□□ 0.07
NUP50-201ENST00000347635 GEMIN4P57678 1058 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 XPO7Q9UIA9 1087 aaKnown RBP15.51■□□□□ 0.07
NUP50-201ENST00000347635 WNT10BO00744 389 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 SHMT1P34896 483 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
NUP50-201ENST00000347635 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
NUP50-201ENST00000347635 PRAMEF18Q5VWM3 479 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 SH3GL3Q99963 347 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 UBXN6Q9BZV1 441 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 MTO1Q9Y2Z2 717 aaKnown RBP15.5■□□□□ 0.07
NUP50-201ENST00000347635 FAM86B1E9PN63 330 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 FAM86B2P0C5J1 330 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 NPY5RQ15761 445 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 HGSNATQ68CP4 663 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 ELMSAN1Q6PJG2 1045 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 FAM149B1Q96BN6 582 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 FGD4Q96M96 766 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 KRT3P12035 628 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 FSCBQ5H9T9 825 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 FEZF2Q8TBJ5 459 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 LRGUKQ96M69 825 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 ANKEF1Q9NU02 776 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 MID2Q9UJV3 735 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 TLK1Q9UKI8 766 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 OAZ1P54368 228 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 TRADDQ15628 312 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 ZNF568Q3ZCX4 644 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 CBWD2Q8IUF1 395 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 DTX3LQ8TDB6 740 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 MANSC1Q9H8J5 431 aa15.5■□□□□ 0.07
NUP50-201ENST00000347635 NCANO14594 1321 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 ENO1P06733 434 aaKnown RBP15.49■□□□□ 0.07
NUP50-201ENST00000347635 PYGMP11217 842 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 ELF3P78545 371 aaPredicted RBP15.49■□□□□ 0.07
NUP50-201ENST00000347635 C3orf62Q6ZUJ4 267 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 BZW1Q7L1Q6 419 aaKnown RBP15.49■□□□□ 0.07
NUP50-201ENST00000347635 KCTD10Q9H3F6 313 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 KCNMB3Q9NPA1 279 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 HAO1Q9UJM8 370 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 GIPC1O14908 333 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 SHBGP04278 402 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 ERMARDQ5T6L9 678 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 TMEM154Q6P9G4 183 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 PTF1AQ7RTS3 328 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 ARHGEF19Q8IW93 802 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 BEST2Q8NFU1 509 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 FANCGO15287 622 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 EXTL3O43909 919 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 MARSP56192 900 aaKnown RBP15.49■□□□□ 0.07
NUP50-201ENST00000347635 PTK7Q13308 1070 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 LAMC2Q13753 1193 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 CDH6P55285 790 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 MRPS35P82673 323 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms