RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 LRRC8DQ7L1W4 858 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 ECHDC2Q86YB7 292 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 LPPQ93052 612 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
ECM1-201ENST00000346569 ZFP42Q96MM3 310 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 GAD1Q99259 594 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 ZSWIM1Q9BR11 485 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 L2HGDHQ9H9P8 463 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
ECM1-201ENST00000346569 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 ARL5CA6NH57 179 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 TMCO5BA8MYB1 307 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 SPTLC1O15269 473 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 TLR3O15455 904 aaKnown RBP11.72□□□□□ -0.53
ECM1-201ENST00000346569 NBNO60934 754 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 TACC1O75410 805 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 MOCS3O95396 460 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 EOMESO95936 686 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 THP07101 528 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 PAEPP09466 180 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 FAM163BP0C2L3 166 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 CD58P19256 250 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 GJA8P48165 433 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 SLC24A5Q71RS6 500 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 TRIM58Q8NG06 486 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 LINC01599Q8WXQ3 324 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 PGBD4Q96DM1 585 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 UBN1Q9NPG3 1134 aa11.72□□□□□ -0.53
ECM1-201ENST00000346569 BARX2Q9UMQ3 279 aaPredicted RBP11.72□□□□□ -0.53
ECM1-201ENST00000346569 ENPP3O14638 875 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 BUB1O43683 1085 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PNPLA4P41247 253 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 HADHBP55084 474 aaKnown RBP11.71□□□□□ -0.53
ECM1-201ENST00000346569 LILRA4P59901 499 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 GPC5P78333 572 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PAPD7Q5XG87 772 aaKnown RBP11.71□□□□□ -0.53
ECM1-201ENST00000346569 TRIM72Q6ZMU5 477 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 TTC39CQ8N584 583 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 ANKLE1Q8NAG6 615 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 TFAP2BQ92481 460 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 ARHGEF26Q96DR7 871 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 NOX5Q96PH1 765 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
ECM1-201ENST00000346569 RSAD1Q9HA92 442 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 GOLGA2P5Q9HBQ8 144 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 SEPT11Q9NVA2 429 aaKnown RBP11.71□□□□□ -0.53
ECM1-201ENST00000346569 SLC38A7Q9NVC3 462 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PCDHGC3Q9UN70 934 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
ECM1-201ENST00000346569 CAPN6Q9Y6Q1 641 aa11.71□□□□□ -0.53
ECM1-201ENST00000346569 PDE4DIPQ5VU43 2346 aa11.71□□□□□ -0.54
ECM1-201ENST00000346569 SCN1AP35498 2009 aa11.71□□□□□ -0.54
ECM1-201ENST00000346569 CTAGE9A4FU28 777 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 KPNA7A9QM74 516 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 THAP12O43422 761 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 CYP1A2P05177 515 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
ECM1-201ENST00000346569 RPL9P32969 192 aaKnown RBP11.7□□□□□ -0.54
ECM1-201ENST00000346569 CDH5P33151 784 aaPredicted RBP11.7□□□□□ -0.54
ECM1-201ENST00000346569 MLH1P40692 756 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 TAF6P49848 677 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
ECM1-201ENST00000346569 TERF1P54274 439 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 TNNC1P63316 161 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 NOMO3P69849 1222 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 AMPD2Q01433 879 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 CENPCQ03188 943 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 TLE2Q04725 743 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 CNGA2Q16280 664 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 DPH6Q7L8W6 267 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 SLFN11Q7Z7L1 901 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 MCOLN2Q8IZK6 566 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 TPCN2Q8NHX9 752 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
ECM1-201ENST00000346569 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 TMEM176AQ96HP8 235 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 VCPIP1Q96JH7 1222 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 NAPGQ99747 312 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms